RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 CYP3A5P20815 502 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 ARFIP1P53367 373 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 MXD1Q05195 221 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 STARD3Q14849 445 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 MSANTD1Q6ZTZ1 278 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 ERMP1Q7Z2K6 904 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 ZNF567Q8N184 647 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 AURKBQ96GD4 344 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 MGME1Q9BQP7 344 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 SLC7A5P2Q9GIP4 190 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 LIN28AQ9H9Z2 209 aaKnown RBP11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 ZFP14Q9HCL3 533 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 SNTG2Q9NY99 539 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 NARFQ9UHQ1 456 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 RRN3P2A6NIE6 340 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 DENRO43583 198 aaKnown RBP11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 BCAS2O75934 225 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 CCNYL3P0C7X3 344 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 ANXA8P13928 327 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 CKMT2P17540 419 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 NFIAQ12857 509 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 ADAM15Q13444 863 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 RAB12Q6IQ22 244 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 COMMD2Q86X83 199 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 CFAP206Q8IYR0 622 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 UBE2J2Q8N2K1 259 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 OR5J2Q8NH18 312 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 JPH3Q8WXH2 748 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 SLCO2A1Q92959 643 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 TCEAL4Q96EI5 215 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 CST11Q9H112 138 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 SNCAIPQ9Y6H5 919 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 GPR75-ASB3A0A0A6YYF3 556 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 BTBD19C9JJ37 291 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 ITGA10O75578 1167 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 MTA2O94776 668 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 THOP1P52888 689 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 TAS2R40P59535 323 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 FOXM1Q08050 763 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 LHFPL3Q86UP9 236 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 SERAC1Q96JX3 654 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 CHIAQ9BZP6 476 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 TTYH3Q9C0H2 523 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 SMURF2Q9HAU4 748 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 COMMD3Q9UBI1 195 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 CNTNAP2Q9UHC6 1331 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 ZNF701M0R085 212 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 RPS6KA4O75676 772 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 RHOCP08134 193 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 CBX5P45973 191 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 RARRES1P49788 294 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 NDST1P52848 882 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 ATP13A4Q4VNC1 1196 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 DDX53Q86TM3 631 aaKnown RBP11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 VANGL1Q8TAA9 524 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 ING5Q8WYH8 240 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 MED8Q96G25 268 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 KLHL5Q96PQ7 755 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 POLR1EQ9GZS1 481 aaKnown RBP11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 PAQR5Q9NXK6 330 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 FAM50BQ9Y247 325 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 ROBO3Q96MS0 1386 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 ADGRB2O60241 1585 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 PDCD5O14737 125 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 PTTG1O95997 202 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 RB1P06400 928 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 ABL2P42684 1182 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 GNPDA1P46926 289 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 RPA4Q13156 261 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 ZDHHC24Q6UX98 284 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 PAMR1Q6UXH9 720 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 TOMM5Q8N4H5 51 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 HEXDCQ8WVB3 486 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 TWIST2Q8WVJ9 160 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 DNAJA4Q8WW22 397 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 MAFIPQ8WZ33 124 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 DNAJC19Q96DA6 116 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 MASTLQ96GX5 879 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 GATA5Q9BWX5 397 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 TRPS1Q9UHF7 1281 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 OAZ3Q9UMX2 235 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 POLR3HQ9Y535 204 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 ST14Q9Y5Y6 855 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 TRIM64A6NGJ6 449 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 TRIM64BA6NI03 449 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 SMIM22K7EJ46 135 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 PPEF2O14830 753 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 CATP04040 527 aaKnown RBP11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 RLN2P04090 185 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 NR2F1P10589 423 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 PTPN3P26045 913 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 ARSHQ5FYA8 562 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 ARMC6Q6NXE6 501 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 ALDH16A1Q8IZ83 802 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 DEFB106AQ8N104 65 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 ZNF781Q8N8C0 355 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 PKP2Q99959 881 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 BCL7BQ9BQE9 202 aa11.69□□□□□ -0.54
CSPG4P12-201ENST00000558282 HEPHQ9BQS7 1158 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms