RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 LIPIQ6XZB0 460 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 SUN2Q9UH99 717 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 TMPRSS11EQ9UL52 423 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 TARM1B6A8C7 271 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 NARSO43776 548 aaKnown RBP20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 ESR1P03372 595 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 ITGB6P18564 788 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 LIG3P49916 1009 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 PFKPQ01813 784 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 ENPP2Q13822 863 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 TSNAXIP1Q2TAA8 658 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 AGAP9Q5VTM2 703 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 LCA5Q86VQ0 697 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 GIMAP7Q8NHV1 300 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 CLPBQ9H078 707 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 FAM83DQ9H4H8 585 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 ALG9Q9H6U8 611 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 DYRK4Q9NR20 520 aa20.24■□□□□ 0.83
SNRPA1-205ENST00000558036 E5RI56 91 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 H3BMM5 538 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 KLF11O14901 512 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 ITM2AO43736 263 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 ZBTB14O43829 449 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 LYPLA1O75608 230 aaPredicted RBP20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 MYL2P10916 166 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 RALBP11234 206 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 ZNF7P17097 686 aaPredicted RBP20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 TNFRSF4P43489 277 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 ADARP55265 1226 aaKnown RBP20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 CNTN1Q12860 1018 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 ACOX1Q15067 660 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 GPR33Q49SQ1 333 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 KIAA1211LQ6NV74 962 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 NAPRTQ6XQN6 538 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 ATG14Q6ZNE5 492 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 SPATA21Q7Z572 469 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 DSG4Q86SJ6 1040 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 CACNA2D3Q8IZS8 1091 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 RBFAQ8N0V3 343 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 PPP1R16AQ96I34 528 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 RIOK2Q9BVS4 552 aaKnown RBP20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 MRPL46Q9H2W6 279 aaKnown RBP20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 NEMP2A6NFY4 417 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 AGAP14A8MT82 685 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 GM2AP17900 193 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 TFEBP19484 476 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 NFKBIAP25963 317 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 P2RY2P41231 377 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 KCNC1P48547 511 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 PTPN5P54829 565 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 STX3Q13277 289 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 ATG16L1Q676U5 607 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 PTRHD1Q6GMV3 140 aaKnown RBP20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 LKAAEAR1Q8TD35 194 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 PTERQ96BW5 349 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 NPHS2Q9NP85 383 aa20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 TSR3Q9UJK0 312 aaKnown RBP20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 OAS3Q9Y6K5 1087 aaKnown RBP20.23■□□□□ 0.83
SNRPA1-205ENST00000558036 NEMP1O14524 444 aa20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 MID1O15344 667 aa20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 MTX2O75431 263 aa20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 VPS26AO75436 327 aa20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 APOA4P06727 396 aa20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 ARRB2P32121 409 aa20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 B4GALNT1Q00973 533 aa20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 TECRLQ5HYJ1 363 aa20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 ZYG11AQ6WRX3 759 aa20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 ERN2Q76MJ5 926 aaKnown RBP20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 TRIM42Q8IWZ5 723 aa20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 CD200R1Q8TD46 325 aa20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 KCNJ9Q92806 393 aa20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 TTC1Q99614 292 aa20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 MRPL57Q9BQC6 102 aaKnown RBP20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 PHF7Q9BWX1 381 aaPredicted RBP20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 POPDC3Q9HBV1 291 aa20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 OXSMQ9NWU1 459 aa20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 MBD1Q9UIS9 605 aaPredicted RBP20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 ZNF106Q9H2Y7 1883 aaKnown RBP20.22■□□□□ 0.83
SNRPA1-205ENST00000558036 C1QTNF3-AMACRE9PGA6 284 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 AREL1O15033 823 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 DLX3O60479 287 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 SNNO75324 88 aaPredicted RBP20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 CD1DP15813 335 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 PPARGP37231 505 aaPredicted RBP20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 SATB1Q01826 763 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 ILF2Q12905 390 aaKnown RBP20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 ZDHHC20Q5W0Z9 365 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 KLC3Q6P597 504 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 TECPR1Q7Z6L1 1165 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 ISCA2Q86U28 154 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 CCDC197Q8NCU1 140 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 TRMT6Q9UJA5 497 aaKnown RBP20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 IKZF3Q9UKT9 509 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 VCANP13611 3396 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 ATG2BQ96BY7 2078 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 FADS2P1A8MWK0 482 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 SYNCRIPO60506 623 aaKnown RBP20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 MMP20O60882 483 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 CD72P21854 359 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 CLCN7P51798 805 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms