RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 BMP1P13497 986 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 RFC2P35250 354 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 CD97P48960 835 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 RPL34P49207 117 aaKnown RBP12.26□□□□□ -0.45
LDLR-205ENST00000557933 SERPINH1P50454 418 aaKnown RBP12.26□□□□□ -0.45
LDLR-205ENST00000557933 BCAP31P51572 246 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 TUBA4AP68366 448 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 RBBP7Q16576 425 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 SGO1Q5FBB7 561 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 RGMBQ6NW40 437 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 NCCRP1Q6ZVX7 275 aaPredicted RBP12.26□□□□□ -0.45
LDLR-205ENST00000557933 BNIPLQ7Z465 357 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 CLYBLQ8N0X4 340 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 OR52B6Q8NGF0 335 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 DPF3Q92784 378 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 TMBIM1Q969X1 311 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 TMEM125Q96AQ2 219 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 UBXN10Q96LJ8 280 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 NEURL2Q9BR09 285 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 BEGAINQ9BUH8 593 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 ANAPC2Q9UJX6 822 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 CFAP99D6REC4 459 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 S1PR4O95977 384 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 GOT2P00505 430 aaKnown RBP12.26□□□□□ -0.45
LDLR-205ENST00000557933 MTHFD2P13995 350 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 HRH2P25021 359 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 CREB5Q02930 508 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 TIGD5Q53EQ6 642 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 TMEM236Q5W0B7 351 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 ENPP6Q6UWR7 440 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 GALNT10Q86SR1 603 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 FNDC5Q8NAU1 212 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 GPRC5AQ8NFJ5 357 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 BORCS5Q969J3 196 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 FCRL5Q96RD9 977 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 NANOGQ9H9S0 305 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 NMUR1Q9HB89 426 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 BPIFA1Q9NP55 256 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 ITM2CQ9NQX7 267 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 ARMC1Q9NVT9 282 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 GDAP2Q9NXN4 497 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 NSMCE4AQ9NXX6 385 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 PKD2L2Q9NZM6 624 aa12.26□□□□□ -0.45
LDLR-205ENST00000557933 KANSL1LA0AUZ9 987 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 RASAL1O95294 804 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 RBP1P09455 135 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 PORP16435 677 aaPredicted RBP12.25□□□□□ -0.45
LDLR-205ENST00000557933 RCVRNP35243 200 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 ADRA1AP35348 466 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 HTR6P50406 440 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 KCNK10P57789 538 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 HERVK_113P63132 956 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 CLCQ05315 142 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 TRIM16LQ309B1 348 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 ZNF829Q3KNS6 432 aaPredicted RBP12.25□□□□□ -0.45
LDLR-205ENST00000557933 SPESP1Q6UW49 350 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 DSG4Q86SJ6 1040 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 CNTN4Q8IWV2 1026 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 Q8N9G6 341 aaPredicted RBP12.25□□□□□ -0.45
LDLR-205ENST00000557933 NTAN1Q96AB6 310 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 TAMM41Q96BW9 452 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 AURKBQ96GD4 344 aaPredicted RBP12.25□□□□□ -0.45
LDLR-205ENST00000557933 ABHD8Q96I13 439 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 UHRF1Q96T88 793 aaPredicted RBP12.25□□□□□ -0.45
LDLR-205ENST00000557933 ERVK-6Q9BXR3 956 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 SARDHQ9UL12 918 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 NEU3Q9UQ49 428 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 PCDHGA8Q9Y5G5 932 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 COMMD10Q9Y6G5 202 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 CCDC162PA2VCL2 907 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 CCDC154A6NI56 674 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 A6NL46 340 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 FAM155AB1AL88 458 aaPredicted RBP12.25□□□□□ -0.45
LDLR-205ENST00000557933 H0Y858 1186 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 MTSS1O43312 755 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 CDH3P22223 829 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 PLA2G16P53816 162 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 GEMP55040 296 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 ATP6V0D1P61421 351 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 SIRPB2Q5JXA9 342 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 GLYATQ6IB77 296 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 C8orf82Q6P1X6 216 aaPredicted RBP12.25□□□□□ -0.45
LDLR-205ENST00000557933 CFAP52Q8N1V2 620 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 TNIP2Q8NFZ5 429 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 CNIH3Q8TBE1 160 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 FRS2Q8WU20 508 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 CCDC138Q96M89 665 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 ALOXE3Q9BYJ1 711 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 AGO3Q9H9G7 860 aaKnown RBP12.25□□□□□ -0.45
LDLR-205ENST00000557933 TLR9Q9NR96 1032 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 ZMYM5Q9UJ78 669 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 RNF112Q9ULX5 631 aa12.25□□□□□ -0.45
LDLR-205ENST00000557933 HHLA1C9JL84 531 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 BTN3A1O00481 513 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 MATN3O15232 486 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 OR1I1O60431 355 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 OR4F21O95013 312 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 DIRAS1O95057 198 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 CD1DP15813 335 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 LBPP18428 481 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms