RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 CKAP4Q07065 602 aaKnown RBP14.2□□□□□ -0.14
USP3-205ENST00000557884 PEX6Q13608 980 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 ITGA9Q13797 1035 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 DHX34Q14147 1143 aaKnown RBP14.2□□□□□ -0.14
USP3-205ENST00000557884 WHAMMP3Q1A5X7 153 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 GPRC6AQ5T6X5 926 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 TSTD2Q5T7W7 516 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 RNASEH2BQ5TBB1 312 aaKnown RBP14.2□□□□□ -0.14
USP3-205ENST00000557884 IZUMO3Q5VZ72 239 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 PSAPL1Q6NUJ1 521 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 CAND1Q86VP6 1230 aaKnown RBP14.2□□□□□ -0.14
USP3-205ENST00000557884 GALNT13Q8IUC8 556 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 PPIL6Q8IXY8 311 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 NAT8LQ8N9F0 302 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 CCL4L1Q8NHW4 92 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 TBATAQ96M53 351 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 ZNF778Q96MU6 729 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 VPS35Q96QK1 796 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 RANBP9Q96S59 729 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 CHRAC1Q9NRG0 131 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 ATXN10Q9UBB4 475 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 ZNHIT2Q9UHR6 403 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 APPL1Q9UKG1 709 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 DOLKQ9UPQ8 538 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 PLEKHM1Q9Y4G2 1056 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 SPAARA0A1B0GVQ0 90 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 CCDC162PA2VCL2 907 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 NEMP2A6NFY4 417 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 OR51F1A6NGY5 319 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 LMO7DNF2Z398 122 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 RAD51CO43502 376 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 SIGLEC6O43699 453 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 CBFA2T3O75081 653 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 KCNK5O95279 499 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 TUBB4AP04350 444 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 GIMD1P0DJR0 217 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 ALPPL2P10696 532 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 MYF5P13349 255 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 ZNF8P17098 575 aaPredicted RBP14.19□□□□□ -0.14
USP3-205ENST00000557884 ITGALP20701 1170 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 CSRP1P21291 193 aaKnown RBP14.19□□□□□ -0.14
USP3-205ENST00000557884 NPY2RP49146 381 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 CDKN1CP49918 316 aaPredicted RBP14.19□□□□□ -0.14
USP3-205ENST00000557884 NFATC2Q13469 925 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 ELOCQ15369 112 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 SKIDA1Q1XH10 827 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 ZRANB3Q5FWF4 1079 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 PCID2Q5JVF3 399 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 CRTC3Q6UUV7 619 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 CES3Q6UWW8 571 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 ZNF572Q7Z3I7 529 aaPredicted RBP14.19□□□□□ -0.14
USP3-205ENST00000557884 TAF8Q7Z7C8 310 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 ADGRG6Q86SQ4 1221 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 MPP5Q8N3R9 675 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 FSTL5Q8N475 847 aaPredicted RBP14.19□□□□□ -0.14
USP3-205ENST00000557884 MCUQ8NE86 351 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 OR13J1Q8NGT2 312 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 KIF18AQ8NI77 898 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 DTX3LQ8TDB6 740 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 HDAC10Q969S8 669 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 CDKN2AIPNLQ96HQ2 116 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 CNDP2Q96KP4 475 aaKnown RBP14.19□□□□□ -0.14
USP3-205ENST00000557884 SERPINB12Q96P63 405 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 OR2M4Q96R27 311 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 IL22Q9GZX6 179 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 TRIM39Q9HCM9 518 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 VPS18Q9P253 973 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 FTSJ1Q9UET6 329 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 CRLS1Q9UJA2 301 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 SLC30A1Q9Y6M5 507 aa14.19□□□□□ -0.14
USP3-205ENST00000557884 AP3B1O00203 1094 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 YY2O15391 372 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 DNAJC6O75061 913 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 LDOC1O95751 146 aaPredicted RBP14.18□□□□□ -0.14
USP3-205ENST00000557884 ANXA6P08133 673 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 IVDP26440 423 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 AK4P27144 223 aaPredicted RBP14.18□□□□□ -0.14
USP3-205ENST00000557884 AKT1P31749 480 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 LAMB3Q13751 1172 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 TRIP6Q15654 476 aaKnown RBP14.18□□□□□ -0.14
USP3-205ENST00000557884 SMAD1Q15797 465 aaKnown RBP14.18□□□□□ -0.14
USP3-205ENST00000557884 PLA2G4EQ3MJ16 856 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 PYCR3Q53H96 274 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 LDLRAP1Q5SW96 308 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 CASC4Q6P4E1 433 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 SLC30A9Q6PML9 568 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 TAS2R42Q7RTR8 314 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 SNX20Q7Z614 316 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 DDHD1Q8NEL9 900 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 OR6P1Q8NGX9 317 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 OR4C6Q8NH72 309 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 BAHD1Q8TBE0 780 aaPredicted RBP14.18□□□□□ -0.14
USP3-205ENST00000557884 NAT14Q8WUY8 206 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 SCARF2Q96GP6 870 aaPredicted RBP14.18□□□□□ -0.14
USP3-205ENST00000557884 TRIM56Q9BRZ2 755 aaKnown RBP14.18□□□□□ -0.14
USP3-205ENST00000557884 XAB2Q9HCS7 855 aaKnown RBP14.18□□□□□ -0.14
USP3-205ENST00000557884 NLGN3Q9NZ94 848 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 SIRPGQ9P1W8 387 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 SNX24Q9Y343 169 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 MRFAP1Q9Y605 127 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms