RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 TTC4O95801 387 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 SLC4A1P02730 911 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 CTAGE8P0CG41 777 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 GRIA1P42261 906 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 CLCNKAP51800 687 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 CACNG1Q06432 222 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 ILF3Q12906 894 aaKnown RBP eCLIP13.56□□□□□ -0.24
SHMT2-234ENST00000557703 CALCOCO2Q13137 446 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 SEPT6Q14141 434 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 RSPO4Q2I0M5 234 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-234ENST00000557703 UAP1L1Q3KQV9 507 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 DNAJC21Q5F1R6 531 aaKnown RBP13.56□□□□□ -0.24
SHMT2-234ENST00000557703 PRRT3Q5FWE3 981 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 AARS2Q5JTZ9 985 aaKnown RBP13.56□□□□□ -0.24
SHMT2-234ENST00000557703 CERCAMQ5T4B2 595 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 FAM151BQ6UXP7 276 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 RFLNAQ6ZTI6 216 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 CTAGE6Q86UF2 777 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 HID1Q8IV36 788 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 CTAGE4Q8IX94 777 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 LMNTD2Q8IXW0 634 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 PDIK1LQ8N165 341 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 PELI3Q8N2H9 469 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 TAB3Q8N5C8 712 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-234ENST00000557703 ZNF548Q8NEK5 533 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-234ENST00000557703 OR6C4Q8NGE1 309 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 OR4C6Q8NH72 309 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 GABPB2Q8TAK5 448 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-234ENST00000557703 GPBAR1Q8TDU6 330 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 SERPINB12Q96P63 405 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 AGAP2Q99490 1192 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 GSDMCQ9BYG8 508 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 FOXP3Q9BZS1 431 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 PHACTR1Q9C0D0 580 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 ASB8Q9H765 288 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 IL21RQ9HBE5 538 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 FGF22Q9HCT0 170 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 BPIFA1Q9NP55 256 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 FSCN3Q9NQT6 498 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 SOX13Q9UN79 622 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 DMXL1Q9Y485 3027 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 TP53BP1Q12888 1972 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-234ENST00000557703 SCN8AQ9UQD0 1980 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 GAPDHSO14556 408 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-234ENST00000557703 KMOO15229 486 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 TTI1O43156 1089 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 ZNF500O60304 480 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-234ENST00000557703 CDK14O94921 469 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 SEC31AO94979 1220 aaKnown RBP13.55□□□□□ -0.24
SHMT2-234ENST00000557703 ASMTLO95671 621 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 ANXA6P08133 673 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 VCLP18206 1134 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 RPIAP49247 311 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 DUSP3P51452 185 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-234ENST00000557703 TUBB4BP68371 445 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 PRAMEP78395 509 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 TMEM115Q12893 351 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-234ENST00000557703 GTF2H3Q13889 308 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 ITIH4Q14624 930 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 CHRNA6Q15825 494 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 PYCR3Q53H96 274 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 TPRG1LQ5T0D9 272 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 ALS2CLQ60I27 953 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 HIBCHQ6NVY1 386 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-234ENST00000557703 ZCCHC8Q6NZY4 707 aaKnown RBP13.55□□□□□ -0.24
SHMT2-234ENST00000557703 AFTPHQ6ULP2 937 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 ZNF534Q76KX8 674 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 CAND1Q86VP6 1230 aaKnown RBP13.55□□□□□ -0.24
SHMT2-234ENST00000557703 GALNT13Q8IUC8 556 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 NAXDQ8IW45 347 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 SLC25A45Q8N413 288 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 MMGT1Q8N4V1 131 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 AVL9Q8NBF6 648 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 OR13C4Q8NGS5 318 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 RHBDD1Q8TEB9 315 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 OR1E3Q8WZA6 343 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 DNAJC1Q96KC8 554 aaKnown RBP13.55□□□□□ -0.24
SHMT2-234ENST00000557703 CARS2Q9HA77 564 aaKnown RBP13.55□□□□□ -0.24
SHMT2-234ENST00000557703 CYP4F12Q9HCS2 524 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 TREX1Q9NSU2 369 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 KLF15Q9UIH9 416 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 CRLS1Q9UJA2 301 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 ANAPC5Q9UJX4 755 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 PCOLCE2Q9UKZ9 415 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 SUFUQ9UMX1 484 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 TDRD6O60522 2096 aaKnown RBP13.55□□□□□ -0.24
SHMT2-234ENST00000557703 TMEM131Q92545 1883 aa13.55□□□□□ -0.24
SHMT2-234ENST00000557703 KNTC1P50748 2209 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 IGLV3-16A0A075B6K0 115 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 GOLGA8CPA6NN73 597 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 INPP4BO15327 924 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 GRID2O43424 1007 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 TNFSF14O43557 240 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 DNAJC6O75061 913 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 CBFA2T3O75081 653 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 TMEM63AO94886 807 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 AP2A2O94973 939 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 SLC2A4P14672 509 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 MC4RP32245 332 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 SESN2P58004 480 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms