RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 STIM1Q13586 685 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 LAMB3Q13751 1172 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 RCN2Q14257 317 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 SMN1Q16637 294 aaKnown RBP3.14□□□□□ -1.91
TRAV28-201ENST00000557548 SLC9C1Q4G0N8 1177 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 ATP13A5Q4VNC0 1218 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 KRTCAP3Q53RY4 240 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 GGNBP1Q5YKI7 109 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 HEPHL1Q6MZM0 1159 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 PAPD4Q6PIY7 484 aaKnown RBP3.14□□□□□ -1.91
TRAV28-201ENST00000557548 MSANTD1Q6ZTZ1 278 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 INTS8Q75QN2 995 aaKnown RBP3.14□□□□□ -1.91
TRAV28-201ENST00000557548 DSG4Q86SJ6 1040 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 HOOK3Q86VS8 718 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 GPSM1Q86YR5 675 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 MFN1Q8IWA4 741 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 RBFAQ8N0V3 343 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 SPATA6LQ8N4H0 392 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 KDM1BQ8NB78 822 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 AGBL3Q8NEM8 1001 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 OR1J2Q8NGS2 313 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 CTCFLQ8NI51 663 aaPredicted RBP3.14□□□□□ -1.91
TRAV28-201ENST00000557548 ARRDC2Q8TBH0 407 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 HM13Q8TCT9 377 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 TAS1R2Q8TE23 839 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 SPACA9Q96E40 222 aaPredicted RBP3.14□□□□□ -1.91
TRAV28-201ENST00000557548 ZNF333Q96JL9 665 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 MSTO1Q9BUK6 570 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 ABHD6Q9BV23 337 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 C1QTNF3Q9BXJ4 246 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 SCAND2PQ9GZW5 306 aaPredicted RBP3.14□□□□□ -1.91
TRAV28-201ENST00000557548 NOL11Q9H8H0 719 aaKnown RBP3.14□□□□□ -1.91
TRAV28-201ENST00000557548 CHMP1AQ9HD42 196 aaPredicted RBP3.14□□□□□ -1.91
TRAV28-201ENST00000557548 NRIP3Q9NQ35 241 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 PIH1D3Q9NQM4 214 aaKnown RBP3.14□□□□□ -1.91
TRAV28-201ENST00000557548 STK39Q9UEW8 545 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 ARMCX3Q9UH62 379 aaPredicted RBP3.14□□□□□ -1.91
TRAV28-201ENST00000557548 TSPYL4Q9UJ04 414 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 RCOR1Q9UKL0 485 aa3.14□□□□□ -1.91
TRAV28-201ENST00000557548 ZNF335Q9H4Z2 1342 aaPredicted RBP3.14□□□□□ -1.91
TRAV28-201ENST00000557548 TRBV5-3A0A0A0MS03 114 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 A0A1W2PPM1 405 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 HTR3EA5X5Y0 456 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 TMEM8BA6NDV4 472 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 EIF4E1BA6NMX2 242 aaKnown RBP3.13□□□□□ -1.91
TRAV28-201ENST00000557548 ANXA2P2A6NMY6 339 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 A6NNC1 897 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 M0QZ24 198 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 CYR61O00622 381 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 KINO60870 393 aaKnown RBP3.13□□□□□ -1.91
TRAV28-201ENST00000557548 KERAO60938 352 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 SLC22A3O75751 556 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 TOMM70O94826 608 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 NDUFB4O95168 129 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 EGFP01133 1207 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 GBAP04062 536 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 ZFYP08048 801 aaPredicted RBP3.13□□□□□ -1.91
TRAV28-201ENST00000557548 LINGO3P0C6S8 592 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 FAM58BPP0C7Q3 252 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 MYZAPP0CAP1 466 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 SRCP12931 536 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 CD58P19256 250 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 CASTP20810 708 aaKnown RBP3.13□□□□□ -1.91
TRAV28-201ENST00000557548 MAOAP21397 527 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 TCEA1P23193 301 aaKnown RBP3.13□□□□□ -1.91
TRAV28-201ENST00000557548 SP100P23497 879 aaPredicted RBP3.13□□□□□ -1.91
TRAV28-201ENST00000557548 AZGP1P25311 298 aaKnown RBP3.13□□□□□ -1.91
TRAV28-201ENST00000557548 AVPR1AP37288 418 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 MTHFRP42898 656 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 CRKLP46109 303 aaKnown RBP3.13□□□□□ -1.91
TRAV28-201ENST00000557548 COMPP49747 757 aaPredicted RBP3.13□□□□□ -1.91
TRAV28-201ENST00000557548 METAP2P50579 478 aaKnown RBP eCLIP3.13□□□□□ -1.91
TRAV28-201ENST00000557548 CDH12P55289 794 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 TUBA4AP68366 448 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 CFHR1Q03591 330 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 RBPJQ06330 500 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 ACTN3Q08043 901 aaPredicted RBP3.13□□□□□ -1.91
TRAV28-201ENST00000557548 ACSM1Q08AH1 577 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 RRS1Q15050 365 aaKnown RBP3.13□□□□□ -1.91
TRAV28-201ENST00000557548 MEP1BQ16820 701 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 SMTNL2Q2TAL5 461 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 VWC2Q2TAL6 325 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 MYLK3Q32MK0 819 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 KLHL26Q53HC5 615 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 GLRA4Q5JXX5 417 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 EPHA10Q5JZY3 1008 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 C6orf10Q5SRN2 563 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 ASPHD1Q5U4P2 390 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 NSUN5P2Q63ZY6 315 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 PLA2G4FQ68DD2 849 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 IGFL4Q6B9Z1 124 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 TATDN1Q6P1N9 297 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 ZNF793Q6ZN11 406 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 CACNA2D4Q7Z3S7 1137 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 KLHL7Q8IXQ5 586 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 RASGEF1CQ8N431 466 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 C8orf58Q8NAV2 365 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 ATAD1Q8NBU5 361 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 WDR20Q8TBZ3 569 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 IGFBPL1Q8WX77 278 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms