RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 UGT1A4P22310 534 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 UGT1A3P35503 534 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 UGT1A5P35504 534 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 MMP12P39900 470 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 TNFRSF4P43489 277 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 ARFIP2P53365 341 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 SEMG2Q02383 582 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 CCDC15Q0P6D6 951 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 ELP6Q0PNE2 266 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 GRIN2CQ14957 1233 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 LRRC73Q5JTD7 316 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 PAQR3Q6TCH7 311 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 MACC1Q6ZN28 852 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 ISCA2Q86U28 154 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 WDR75Q8IWA0 830 aaKnown RBP12.38□□□□□ -0.43
SHMT2-233ENST00000557529 RFWD2Q8NHY2 731 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 PIP4K2CQ8TBX8 421 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 PIWIL2Q8TC59 973 aaKnown RBP12.38□□□□□ -0.43
SHMT2-233ENST00000557529 CCT6BQ92526 530 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 COPS8Q99627 209 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 RPP25Q9BUL9 199 aaKnown RBP12.38□□□□□ -0.43
SHMT2-233ENST00000557529 DRC3Q9H069 523 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 TTYH1Q9H313 450 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-233ENST00000557529 FAM83DQ9H4H8 585 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 ALG9Q9H6U8 611 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 DYRK4Q9NR20 520 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 SMOXQ9NWM0 555 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 ZDHHC3Q9NYG2 299 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 NCKIPSDQ9NZQ3 722 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 DCTN4Q9UJW0 460 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 DNAJC16Q9Y2G8 782 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 DENND4AQ7Z401 1863 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 ZNF106Q9H2Y7 1883 aaKnown RBP12.38□□□□□ -0.43
SHMT2-233ENST00000557529 A0A0G2JND7 137 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 H0Y858 1186 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 GPR39O43194 453 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 ITM2AO43736 263 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 ZBTB14O43829 449 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 NPHS1O60500 1241 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 IPO13O94829 963 aaKnown RBP12.37□□□□□ -0.43
SHMT2-233ENST00000557529 EPHX1P07099 455 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 IGFBP4P22692 258 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 IL12RB1P42701 662 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 NSG1P42857 185 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 HK2P52789 917 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 IL2P60568 153 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 RALGDSQ12967 914 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 ADGRE1Q14246 886 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 RCN2Q14257 317 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 CRY1Q16526 586 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 SETMARQ53H47 684 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-233ENST00000557529 FAM46CQ5VWP2 391 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 NAIF1Q69YI7 327 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-233ENST00000557529 FBXL19Q6PCT2 694 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 NAPRTQ6XQN6 538 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 PIWIL4Q7Z3Z4 852 aaKnown RBP12.37□□□□□ -0.43
SHMT2-233ENST00000557529 HSD11B1LQ7Z5J1 315 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 SFTPA1Q8IWL2 248 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 NRSN1Q8IZ57 195 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 TRAM1L1Q8N609 369 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 STAG3L4Q8TBR4 150 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 CD200R1Q8TD46 325 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 INPP5DQ92835 1189 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 KIAA1191Q96A73 305 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 CHFRQ96EP1 664 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 SGF29Q96ES7 293 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 RMDN2Q96LZ7 410 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 FAM129BQ96TA1 746 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 SORT1Q99523 831 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 P2RY13Q9BPV8 354 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 TMEM120AQ9BXJ8 343 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 UNKQ9C0B0 810 aaKnown RBP12.37□□□□□ -0.43
SHMT2-233ENST00000557529 C20orf27Q9GZN8 174 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 WWP1Q9H0M0 922 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 STN1Q9H668 368 aaKnown RBP12.37□□□□□ -0.43
SHMT2-233ENST00000557529 PRSS16Q9NQE7 514 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 TMCO1Q9UM00 188 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 DHRS7Q9Y394 339 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 MUC22E2RYF6 1773 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-233ENST00000557529 SCN8AQ9UQD0 1980 aa12.37□□□□□ -0.43
SHMT2-233ENST00000557529 IGLV3-16A0A075B6K0 115 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 SYCE1LA8MT33 242 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 A8MT66 165 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 LYPLA1O75608 230 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-233ENST00000557529 ELFN1P0C7U0 828 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 TPBGLP0DKB5 382 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 RGS4P49798 205 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 CLCN7P51798 805 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 NAGLUP54802 743 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 NFKB2Q00653 900 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 PRKAA1Q13131 559 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 ENPP2Q13822 863 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 ZNF284Q2VY69 593 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 ATP13A5Q4VNC0 1218 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 LACTB2Q53H82 288 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-233ENST00000557529 CFAP157Q5JU67 520 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 EGFLAMQ63HQ2 1017 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 TRIM67Q6ZTA4 783 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 RAB44Q7Z6P3 723 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-233ENST00000557529 SIDT2Q8NBJ9 832 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms