RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 DNALI1O14645 258 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-230ENST00000557427 FGF10O15520 208 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-230ENST00000557427 CST8O60676 142 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 SHOX2O60902 331 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-230ENST00000557427 SEMA7AO75326 666 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 AGFG2O95081 481 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 POP4O95707 220 aaKnown RBP12.5□□□□□ -0.41
SHMT2-230ENST00000557427 APOC2P02655 101 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 RPLP0P05388 317 aaKnown RBP12.5□□□□□ -0.41
SHMT2-230ENST00000557427 CELA2BP08218 269 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-230ENST00000557427 GEMIN4P57678 1058 aaKnown RBP12.5□□□□□ -0.41
SHMT2-230ENST00000557427 YBEYP58557 167 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-230ENST00000557427 SNRPD1P62314 119 aaKnown RBP12.5□□□□□ -0.41
SHMT2-230ENST00000557427 ZFP36L1Q07352 338 aaKnown RBP12.5□□□□□ -0.41
SHMT2-230ENST00000557427 TFDP2Q14188 446 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 SMTNL2Q2TAL5 461 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 PRRT3Q5FWE3 981 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 IZUMO3Q5VZ72 239 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 HIBCHQ6NVY1 386 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-230ENST00000557427 TICAM1Q8IUC6 712 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 MAP7D3Q8IWC1 876 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 UMODL1-AS1Q8N2C9 162 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 ARFGAP2Q8N6H7 521 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 OR2W6PQ8NHA6 318 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 C9orf43Q8TAL5 461 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-230ENST00000557427 FAM174AQ8TBP5 190 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 HSPH1Q92598 858 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 NKD1Q969G9 470 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 ISG20Q96AZ6 181 aaKnown RBP12.5□□□□□ -0.41
SHMT2-230ENST00000557427 PPP1R16AQ96I34 528 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 LRRC61Q9BV99 259 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 HDAC8Q9BY41 377 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 SLC17A9Q9BYT1 436 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 SLC39A8Q9C0K1 460 aa12.5□□□□□ -0.41
SHMT2-230ENST00000557427 ITPR3Q14573 2671 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 C16orf96A6NNT2 1141 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 LMO7DNF2Z398 122 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 TMX2-CTNND1H3BSU7 103 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 J3KR12 359 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 RIPK2O43353 540 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 TMCC1O94876 653 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 ERCC2P18074 760 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 NR1D1P20393 614 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 DCTP40126 519 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 PAPOLAP51003 745 aaKnown RBP12.49□□□□□ -0.41
SHMT2-230ENST00000557427 MAPK10P53779 464 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 CDH6P55285 790 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 RHOAP61586 193 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 OTUD4Q01804 1114 aaKnown RBP12.49□□□□□ -0.41
SHMT2-230ENST00000557427 IFFO1Q0D2I5 559 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 CYTH1Q15438 398 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 TRIP13Q15645 432 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-230ENST00000557427 PARP15Q460N3 678 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 RFX8Q6ZV50 586 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 TMPRSS9Q7Z410 1059 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 ATCAYQ86WG3 371 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 RFX6Q8HWS3 928 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 OR2AP1Q8NGE2 309 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 ACTL9Q8TC94 416 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 SSC4DQ8WTU2 575 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 GLMNQ92990 594 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 ABHD17AQ96GS6 310 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 KLHL32Q96NJ5 620 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 TMEM74Q96NL1 305 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 PHF12Q96QT6 1004 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 FAM118BQ9BPY3 351 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 CPEB1Q9BZB8 566 aaKnown RBP12.49□□□□□ -0.41
SHMT2-230ENST00000557427 ZNF768Q9H5H4 540 aaKnown RBP12.49□□□□□ -0.41
SHMT2-230ENST00000557427 CWC15Q9P013 229 aaKnown RBP12.49□□□□□ -0.41
SHMT2-230ENST00000557427 SPASTQ9UBP0 616 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 GULP1Q9UBP9 304 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 OTOGQ6ZRI0 2925 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 UNC13CQ8NB66 2214 aa12.49□□□□□ -0.41
SHMT2-230ENST00000557427 DFFAO00273 331 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 NEMP1O14524 444 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 INSIG1O15503 277 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 GSRP00390 522 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 UGT2B4P06133 528 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 CD48P09326 243 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 ADRB3P13945 408 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 LIFP15018 202 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 TSHRP16473 764 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 GNLYP22749 145 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 AMPD1P23109 780 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 ITGB7P26010 798 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 ELAVL4P26378 380 aaKnown RBP12.48□□□□□ -0.41
SHMT2-230ENST00000557427 HTR7P34969 479 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 RABIFP47224 123 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 NEK3P51956 506 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 PFN3P60673 137 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 RAD51Q06609 339 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 DPYSL3Q14195 570 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 KRT81Q14533 505 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 SLC29A2Q14542 456 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 MORF4L2Q15014 288 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 NOMO1Q15155 1222 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 KRT71Q3SY84 523 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 INO80DQ53TQ3 878 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-230ENST00000557427 FHL5Q5TD97 284 aa12.48□□□□□ -0.41
SHMT2-230ENST00000557427 KCTD16Q68DU8 428 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms