RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 O00370 1275 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 BUB1BO60566 1050 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-245ENST00000556958 CPNE3O75131 537 aaKnown RBP5.68□□□□□ -1.5
ATXN3-245ENST00000556958 ZMPSTE24O75844 475 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 RECQL5O94762 991 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-245ENST00000556958 C9P02748 559 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 RPLP1P05386 114 aaKnown RBP5.68□□□□□ -1.5
ATXN3-245ENST00000556958 CEACAM5P06731 702 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 H2AFB1P0C5Y9 115 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 H2AFB2P0C5Z0 115 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 MYCLP1P12525 358 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-245ENST00000556958 ITIH2P19823 946 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 CD33P20138 364 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 PCSK6P29122 969 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 GKP32189 559 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 ADCY8P40145 1251 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 STAT6P42226 847 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 ACADSBP45954 432 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 DGKQP52824 942 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 SOX8P57073 446 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 GSDMDP57764 484 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 YWHAZP63104 245 aaKnown RBP5.68□□□□□ -1.5
ATXN3-245ENST00000556958 ACY1Q03154 408 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 NFATC2Q13469 925 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 ATP1A4Q13733 1029 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 LAMB3Q13751 1172 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 ZNF169Q14929 603 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-245ENST00000556958 STILQ15468 1287 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 CNGA2Q16280 664 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 LRRC73Q5JTD7 316 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-245ENST00000556958 CFAP58Q5T655 872 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 SYPL2Q5VXT5 272 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 PWWP2BQ6NUJ5 590 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 PNCKQ6P2M8 343 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 CAMKMTQ7Z624 323 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 ZBTB2Q8N680 514 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 ACBD4Q8NC06 268 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 TAS1R2Q8TE23 839 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 SLC37A2Q8TED4 501 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 CLEC4CQ8WTT0 213 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 TMEM158Q8WZ71 300 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 ZDHHC12Q96GR4 267 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 SMR3AQ99954 134 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 TREX2Q9BQ50 279 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-245ENST00000556958 LGR4Q9BXB1 951 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 SIK2Q9H0K1 926 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 FAM204AQ9H8W3 233 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 AKIRIN1Q9H9L7 192 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-245ENST00000556958 WASH6PQ9NQA3 447 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 DDIT4Q9NX09 232 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 STMN3Q9NZ72 180 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 HPCAL4Q9UM19 191 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 SUFUQ9UMX1 484 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 SLC30A1Q9Y6M5 507 aa5.68□□□□□ -1.5
ATXN3-245ENST00000556958 SCN8AQ9UQD0 1980 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 ANKRD33BA6NCL7 494 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 A6NHS1 94 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 OR5K4A6NMS3 321 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 IGLV3-25P01717 112 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 IVLP07476 585 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 AMD1P17707 334 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 CA5AP35218 305 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 GCLMP48507 274 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 NEK4P51957 841 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 TUBB3Q13509 450 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 EIF4EBP2Q13542 120 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-245ENST00000556958 GRM3Q14832 879 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 UGP2Q16851 508 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 ALFQ53S48 1182 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 CACHD1Q5VU97 1274 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 IRAK1BP1Q5VVH5 260 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 TECPR1Q7Z6L1 1165 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 ENDOVQ8N8Q3 282 aaKnown RBP5.67□□□□□ -1.5
ATXN3-245ENST00000556958 SIDT2Q8NBJ9 832 aaKnown RBP5.67□□□□□ -1.5
ATXN3-245ENST00000556958 ACRBPQ8NEB7 543 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 ANKRD20A12PQ8NF67 263 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 OR7D4Q8NG98 312 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 TMEM174Q8WUU8 243 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 KLHL6Q8WZ60 621 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 NR4A3Q92570 626 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 CNDP1Q96KN2 507 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 GDAP1L1Q96MZ0 367 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 LRFN5Q96NI6 719 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 TGM7Q96PF1 710 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 GBP5Q96PP8 586 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 CITED4Q96RK1 184 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 CHST8Q9H2A9 424 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 THAP9Q9H5L6 903 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 PCDH12Q9NPG4 1184 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 ST7Q9NRC1 585 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 DMAC2Q9NW81 257 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 TMEM51Q9NW97 253 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 CNOT8Q9UFF9 292 aaKnown RBP5.67□□□□□ -1.5
ATXN3-245ENST00000556958 ST6GALNAC2Q9UJ37 374 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 LIMCH1Q9UPQ0 1083 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 MFHAS1Q9Y4C4 1052 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 MYH10P35580 1976 aa5.67□□□□□ -1.5
ATXN3-245ENST00000556958 TP53BP1Q12888 1972 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-245ENST00000556958 NSD1Q96L73 2696 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms