RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 GM2AP17900 193 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 ACTR1BP42025 376 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 SPINT3P49223 89 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 STC1P52823 247 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 INHBCP55103 352 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 ACTR1AP61163 376 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 CDK18Q07002 472 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 NIPAL4Q0D2K0 466 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 CCDC173Q0VFZ6 552 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 PCSK7Q16549 785 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 CERCAMQ5T4B2 595 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 MFSD7Q6UXD7 560 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 PDZD3Q86UT5 571 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 JAZF1Q86VZ6 243 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 FBXO39Q8N4B4 442 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 GPBAR1Q8TDU6 330 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 LRRC45Q96CN5 670 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 VAT1Q99536 393 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 KRTAP3-3Q9BYR6 98 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 KRTAP3-2Q9BYR7 98 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 FRMD8Q9BZ67 464 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-222ENST00000556768 DPH1Q9BZG8 443 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 GPR63Q9BZJ6 419 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 LRRN3Q9H3W5 708 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 RMI1Q9H9A7 625 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 MAGEE1Q9HCI5 957 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 TAAR2Q9P1P5 351 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 SLC17A4Q9Y2C5 497 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 HYOU1Q9Y4L1 999 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 BPTFQ12830 3046 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 C3orf70A6NLC5 250 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-222ENST00000556768 D6RAR5 112 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 TGFBR3LH3BV60 316 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 NTN3O00634 580 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-222ENST00000556768 PLD2O14939 933 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 INPP4BO15327 924 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 ZNF189O75820 626 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-222ENST00000556768 TNFSF15O95150 251 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 SLC25A14O95258 325 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-222ENST00000556768 NDUFA10O95299 355 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 LCA5LO95447 670 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 PRLP01236 227 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 SLC2A4P14672 509 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 ADCY8P40145 1251 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 CDKN2BP42772 138 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 PTGIRP43119 386 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 GPR3P46089 330 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 POLD2P49005 469 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 CCL7P80098 99 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 CTBSQ01459 385 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 ZBTB17Q13105 803 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 HLTFQ14527 1009 aaKnown RBP eCLIP7.27□□□□□ -1.251e-7■□□□□ 9.6
SCFD1-222ENST00000556768 CLPPQ16740 277 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-222ENST00000556768 AMZ1Q400G9 498 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 MAP9Q49MG5 647 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 ZDHHC20Q5W0Z9 365 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 IGF2-ASQ6U949 168 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 NPNTQ6UXI9 565 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 SPOCD1Q6ZMY3 1216 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 MARK2Q7KZI7 788 aaKnown RBP7.27□□□□□ -1.25
SCFD1-222ENST00000556768 RAB11FIP2Q7L804 512 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 PID1Q7Z2X4 250 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 ZC3H18Q86VM9 953 aaKnown RBP7.27□□□□□ -1.25
SCFD1-222ENST00000556768 KATNAL2Q8IYT4 538 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 CNTD1Q8N815 330 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 KCNE4Q8WWG9 221 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 HAUS1Q96CS2 278 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 IMP4Q96G21 291 aaKnown RBP7.27□□□□□ -1.25
SCFD1-222ENST00000556768 LIN37Q96GY3 246 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-222ENST00000556768 AHCYL2Q96HN2 611 aaKnown RBP7.27□□□□□ -1.25
SCFD1-222ENST00000556768 NAF1Q96HR8 494 aaKnown RBP7.27□□□□□ -1.25
SCFD1-222ENST00000556768 TEKT5Q96M29 485 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 TTC25Q96NG3 672 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 OLFM3Q96PB7 478 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 OR2M4Q96R27 311 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 ZSCAN5AQ9BUG6 496 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 SPATA16Q9BXB7 569 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 CEP41Q9BYV8 373 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 GLOD4Q9HC38 313 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 EPB41L5Q9HCM4 733 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 VPS18Q9P253 973 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 KLHL8Q9P2G9 620 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-222ENST00000556768 FAM153AQ9UHL3 310 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 DMGDHQ9UI17 866 aaKnown RBP7.27□□□□□ -1.25
SCFD1-222ENST00000556768 TRHDEQ9UKU6 1024 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 TMEM98Q9Y2Y6 226 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 ENTPD2Q9Y5L3 495 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 CACNA1GO43497 2377 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 MACROD2A1Z1Q3 448 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 CCDC66A2RUB6 948 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 HACD1B0YJ81 288 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 GPR89AB7ZAQ6 455 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 KLK10O43240 276 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 NOBOXO60393 691 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 PMPCBO75439 489 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 ECEL1O95672 775 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 CPNE6O95741 557 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 NDST3O95803 873 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 EPOP01588 193 aa7.27□□□□□ -1.25
SCFD1-222ENST00000556768 SLC4A1P02730 911 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms