RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 MPP5Q8N3R9 675 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 SLC4A11Q8NBS3 891 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 MYOZ2Q9NPC6 264 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 MAU2Q9Y6X3 613 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 I3L521 148 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 GTPBP1O00178 669 aaKnown RBP10.8□□□□□ -0.68
SPTB-208ENST00000556626 LGI2Q8N0V4 545 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 RASGEF1CQ8N431 466 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 POF1BQ8WVV4 589 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 PNMA5Q96PV4 448 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 SPG21Q9NZD8 308 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 GPN3Q9UHW5 284 aaPredicted RBP10.8□□□□□ -0.68
SPTB-208ENST00000556626 PDLIM1O00151 329 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 SLITRK3O94933 977 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 CD83Q01151 205 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 IRAK1BP1Q5VVH5 260 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 DEFB106AQ8N104 65 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 TOR1AIP2Q8NFQ8 470 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 PPCDCQ96CD2 204 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 SUCOQ9UBS9 1254 aaKnown RBP10.8□□□□□ -0.68
SPTB-208ENST00000556626 ARID1AO14497 2285 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 ARF3P61204 181 aaPredicted RBP10.8□□□□□ -0.68
SPTB-208ENST00000556626 ARF1P84077 181 aaKnown RBP10.8□□□□□ -0.68
SPTB-208ENST00000556626 MPP2Q14168 576 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 TMEM192Q8IY95 271 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 OR4L1Q8NH43 312 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 SNTG2Q9NY99 539 aa10.8□□□□□ -0.68
SPTB-208ENST00000556626 PRAMEF1O95521 474 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 FSHRP23945 695 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 RIPPLY1Q0D2K3 151 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 TIGD6Q17RP2 521 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 EIF5AL1Q6IS14 154 aaKnown RBP10.79□□□□□ -0.68
SPTB-208ENST00000556626 HMBOX1Q6NT76 420 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 TMEM86AQ8N2M4 240 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 CLIP4Q8N3C7 705 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 AKAP1Q92667 903 aaKnown RBP eCLIP10.79□□□□□ -0.687e-7■■■■■ 29.5
SPTB-208ENST00000556626 ZNF639Q9UID6 485 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 LACTBL1A8MY62 500 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 M0R036 132 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 GJB6O95452 261 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 NIPAL1Q6NVV3 410 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 FAM117BQ6P1L5 589 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 CCDC28AQ8IWP9 274 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 RBFAQ8N0V3 343 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 ZNF567Q8N184 647 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 C12orf43Q96C57 262 aaKnown RBP10.79□□□□□ -0.68
SPTB-208ENST00000556626 ZNF350Q9GZX5 532 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 UNC93B1Q9H1C4 597 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 TBCCD1Q9NVR7 557 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 UXTQ9UBK9 157 aaPredicted RBP10.79□□□□□ -0.68
SPTB-208ENST00000556626 ZNF99A8MXY4 864 aaPredicted RBP10.79□□□□□ -0.68
SPTB-208ENST00000556626 KRT33AO76009 404 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 RARRES1P49788 294 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 SNRPD1P62314 119 aaKnown RBP10.79□□□□□ -0.68
SPTB-208ENST00000556626 CTBP1Q13363 440 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 SH3D19Q5HYK7 790 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 ZNF410Q86VK4 478 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 DENND6BQ8NEG7 585 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 CSGALNACT1Q8TDX6 532 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 HIPK3Q9H422 1215 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 BRD9Q9H8M2 597 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 PCDHGC3Q9UN70 934 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 KCNK18Q7Z418 384 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 METTL3Q86U44 580 aaKnown RBP10.79□□□□□ -0.68
SPTB-208ENST00000556626 ATG4CQ96DT6 458 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 TMEM168Q9H0V1 697 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 MARCH2Q9P0N8 246 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 KCNE2Q9Y6J6 123 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 IFT172Q9UG01 1749 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 ROBO3Q96MS0 1386 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 SETD1AO15047 1707 aaKnown RBP10.79□□□□□ -0.68
SPTB-208ENST00000556626 TNFRSF11BO00300 401 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 HNRNPH3P31942 346 aaKnown RBP10.79□□□□□ -0.68
SPTB-208ENST00000556626 KIR3DL1P43629 444 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 KLF10Q13118 480 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 FBXO43Q4G163 708 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 ZNF557Q8N988 423 aaPredicted RBP10.79□□□□□ -0.68
SPTB-208ENST00000556626 LRTOMTQ8WZ04 291 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 KAT8Q9H7Z6 458 aaKnown RBP10.79□□□□□ -0.68
SPTB-208ENST00000556626 CCDC177Q9NQR7 707 aaPredicted RBP10.79□□□□□ -0.68
SPTB-208ENST00000556626 ZNF69Q9UC07 566 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 OR6C70A6NIJ9 312 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 GOT1P17174 413 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 STOMP27105 288 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 AP2S1P53680 142 aaPredicted RBP10.79□□□□□ -0.68
SPTB-208ENST00000556626 CDH8P55286 799 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 MXD1Q05195 221 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 ELAVL2Q12926 359 aaKnown RBP10.79□□□□□ -0.68
SPTB-208ENST00000556626 CPSF6Q16630 551 aaKnown RBP eCLIP10.79□□□□□ -0.68
SPTB-208ENST00000556626 DCST1Q5T197 706 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 FBXO16Q8IX29 292 aaPredicted RBP10.79□□□□□ -0.68
SPTB-208ENST00000556626 CHIAQ9BZP6 476 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 ZYG11BQ9C0D3 744 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 RSPH9Q9H1X1 276 aaPredicted RBP10.79□□□□□ -0.68
SPTB-208ENST00000556626 PLEKHA1Q9HB21 404 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 PCDHB5Q9Y5E4 795 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 RGPD8O14715 1765 aaPredicted RBP10.79□□□□□ -0.68
SPTB-208ENST00000556626 USP31Q70CQ4 1352 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 SPATA31A3Q5VYP0 1347 aa10.79□□□□□ -0.68
SPTB-208ENST00000556626 KMOO15229 486 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms