RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 PPARGP37231 505 aaPredicted RBP4.45□□□□□ -1.7
SCFD1-221ENST00000556534 PIK3CAP42336 1068 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 PRCPP42785 496 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 ISL1P61371 349 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 TFAP4Q01664 338 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 SREBF2Q12772 1141 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 MAMLD1Q13495 774 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 ZNF234Q14588 700 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 PCGF3Q3KNV8 242 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 KRTCAP3Q53RY4 240 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 KLHL35Q6PF15 583 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 CFAP77Q6ZQR2 320 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 ASB18Q6ZVZ8 466 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 CUZD1Q86UP6 607 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 GPR180Q86V85 440 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 EXOC3L1Q86VI1 746 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 KMT5CQ86Y97 462 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.45□□□□□ -1.7
SCFD1-221ENST00000556534 HJURPQ8NCD3 748 aaPredicted RBP4.45□□□□□ -1.7
SCFD1-221ENST00000556534 TRPC4APQ8TEL6 797 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 SLC44A1Q8WWI5 657 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 CHCHD6Q9BRQ6 235 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 RALYQ9UKM9 306 aaKnown RBP4.45□□□□□ -1.7
SCFD1-221ENST00000556534 ICAM5Q9UMF0 924 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 MTMR6Q9Y217 621 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 ZNF711Q9Y462 761 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 ITIH6Q6UXX5 1313 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 BMPR1BO00238 502 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 ANKRD28O15084 1053 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 KCNN4O15554 427 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 SH3BP5O60239 455 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 WDHD1O75717 1129 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-221ENST00000556534 GNL1P36915 607 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-221ENST00000556534 GALCP54803 685 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 ACSM2AQ08AH3 577 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 ARL16Q0P5N6 197 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 CDC16Q13042 620 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 NAB2Q15742 525 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 CCDC96Q2M329 555 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 STXBP5Q5T5C0 1151 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 NSUN5P2Q63ZY6 315 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 ACSM2BQ68CK6 577 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 PMS2CLQ68D20 193 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 DSG4Q86SJ6 1040 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 SLC9B2Q86UD5 537 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 POMGNT1Q8WZA1 660 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 CDCA5Q96FF9 252 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 SYT17Q9BSW7 474 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 SIL1Q9H173 461 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 SH2D4AQ9H788 454 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 R3HDM2Q9Y2K5 976 aaKnown RBP4.44□□□□□ -1.7
SCFD1-221ENST00000556534 TMEM184BQ9Y519 407 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-221ENST00000556534 LYVE1Q9Y5Y7 322 aa4.44□□□□□ -1.7
SCFD1-221ENST00000556534 ARHGEF40Q8TER5 1519 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 A0A087WYN8 130 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 ASPDHA6ND91 283 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 EIF4E1BA6NMX2 242 aaKnown RBP4.43□□□□□ -1.7
SCFD1-221ENST00000556534 H3BQ06 376 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-221ENST00000556534 XPNPEP2O43895 674 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 POLR2CP19387 275 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-221ENST00000556534 GARSP41250 739 aaKnown RBP4.43□□□□□ -1.7
SCFD1-221ENST00000556534 SPOCK1Q08629 439 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 PDE1CQ14123 709 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-221ENST00000556534 SYT16Q17RD7 645 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 MYLK3Q32MK0 819 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 KIAA0930Q6ICG6 404 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-221ENST00000556534 TMEM154Q6P9G4 183 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 RAD9BQ6WBX8 426 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 CLEC17AQ6ZS10 378 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 TMPRSS12Q86WS5 348 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 HACE1Q8IYU2 909 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 MUC20Q8N307 709 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-221ENST00000556534 IL17RCQ8NAC3 791 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 HM13Q8TCT9 377 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 SCFD2Q8WU76 684 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 CD101Q93033 1021 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 FEM1CQ96JP0 617 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 CMTM3Q96MX0 182 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 OR2A14Q96R47 310 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 KAT14Q9H8E8 782 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 EPB41L5Q9HCM4 733 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 ABCF3Q9NUQ8 709 aa4.43□□□□□ -1.7
SCFD1-221ENST00000556534 SEPT11Q9NVA2 429 aaKnown RBP4.43□□□□□ -1.7
SCFD1-221ENST00000556534 SMAD9O15198 467 aaKnown RBP4.42□□□□□ -1.7
SCFD1-221ENST00000556534 OGG1O15527 345 aa4.42□□□□□ -1.7
SCFD1-221ENST00000556534 UMODP07911 640 aa4.42□□□□□ -1.7
SCFD1-221ENST00000556534 FAM106CPP0CH98 169 aa4.42□□□□□ -1.7
SCFD1-221ENST00000556534 GABRB1P18505 474 aa4.42□□□□□ -1.7
SCFD1-221ENST00000556534 ANXA7P20073 488 aaKnown RBP4.42□□□□□ -1.7
SCFD1-221ENST00000556534 HADHAP40939 763 aa4.42□□□□□ -1.7
SCFD1-221ENST00000556534 GPR143P51810 404 aa4.42□□□□□ -1.7
SCFD1-221ENST00000556534 ARF3P61204 181 aaPredicted RBP4.42□□□□□ -1.7
SCFD1-221ENST00000556534 PITX1P78337 314 aaPredicted RBP4.42□□□□□ -1.7
SCFD1-221ENST00000556534 PRAMEP78395 509 aa4.42□□□□□ -1.7
SCFD1-221ENST00000556534 ARF1P84077 181 aaKnown RBP4.42□□□□□ -1.7
SCFD1-221ENST00000556534 LRMPQ12912 555 aa4.42□□□□□ -1.7
SCFD1-221ENST00000556534 GTF2H2Q13888 395 aa4.42□□□□□ -1.7
SCFD1-221ENST00000556534 RAB6CQ53S08 254 aa4.42□□□□□ -1.7
SCFD1-221ENST00000556534 GTF2H2CQ6P1K8 395 aa4.42□□□□□ -1.7
SCFD1-221ENST00000556534 ZNF704Q6ZNC4 412 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms