RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 PDP2Q9P2J9 529 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 ATXN10Q9UBB4 475 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 RPL26L1Q9UNX3 145 aaKnown RBP13.15□□□□□ -0.3
TGFB3-204ENST00000556285 NAV2Q8IVL1 2488 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 C3orf70A6NLC5 250 aaPredicted RBP13.14□□□□□ -0.31
TGFB3-204ENST00000556285 B4E171 279 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 DUX1O43812 170 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 RAD1O60671 282 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 PYGLP06737 847 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 KRT7P08729 469 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 ZNF8P17098 575 aaPredicted RBP13.14□□□□□ -0.31
TGFB3-204ENST00000556285 HNRNPH3P31942 346 aaKnown RBP13.14□□□□□ -0.31
TGFB3-204ENST00000556285 TSPAN7P41732 249 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 MAPK9P45984 424 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 CSRP3P50461 194 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 PPIDQ08752 370 aaKnown RBP13.14□□□□□ -0.31
TGFB3-204ENST00000556285 MESDQ14696 234 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 ASTE1Q2TB18 679 aaPredicted RBP13.14□□□□□ -0.31
TGFB3-204ENST00000556285 ZFYVE27Q5T4F4 411 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 ARHGAP22Q7Z5H3 698 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 CACNA2D3Q8IZS8 1091 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 IL22RA1Q8N6P7 574 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 GPR26Q8NDV2 337 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 OR10G6Q8NH81 332 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 NCSTNQ92542 709 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 TRIB3Q96RU7 358 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 TBC1D10AQ9BXI6 508 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 SPRY4Q9C004 299 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 XPO4Q9C0E2 1151 aaKnown RBP13.14□□□□□ -0.31
TGFB3-204ENST00000556285 APMAPQ9HDC9 416 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 SARS2Q9NP81 518 aaKnown RBP13.14□□□□□ -0.31
TGFB3-204ENST00000556285 PRDM8Q9NQV8 689 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 PKD2L2Q9NZM6 624 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 SCHIP1Q9P0W5 487 aaPredicted RBP13.14□□□□□ -0.31
TGFB3-204ENST00000556285 UVRAGQ9P2Y5 699 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 SLC23A2Q9UGH3 650 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 KLHL3Q9UH77 587 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 DNPEPQ9ULA0 475 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 SHOC2Q9UQ13 582 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 HEY1Q9Y5J3 304 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 HEMK1Q9Y5R4 338 aaPredicted RBP13.14□□□□□ -0.31
TGFB3-204ENST00000556285 ADGRG1Q9Y653 693 aa13.14□□□□□ -0.31
TGFB3-204ENST00000556285 LRRD1A4D1F6 860 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 GRID2O43424 1007 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 NUAK1O60285 661 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 SLC4A1P02730 911 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 H2AFZP0C0S5 128 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 MX2P20592 715 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 CA4P22748 312 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 ATP1A2P50993 1020 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 TPM4P67936 248 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 IFI35P80217 286 aaPredicted RBP13.13□□□□□ -0.31
TGFB3-204ENST00000556285 SRSF1Q07955 248 aaKnown RBP eCLIP13.13□□□□□ -0.31
TGFB3-204ENST00000556285 SLC18A3Q16572 532 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 PLA2G4EQ3MJ16 856 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 COLEC12Q5KU26 742 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 DCAF12Q5T6F0 453 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 WDR74Q6RFH5 385 aaPredicted RBP13.13□□□□□ -0.31
TGFB3-204ENST00000556285 CRTC3Q6UUV7 619 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 XKR5Q6UX68 686 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 H2AFVQ71UI9 128 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 TIPARPQ7Z3E1 657 aaKnown RBP13.13□□□□□ -0.31
TGFB3-204ENST00000556285 PTRH1Q86Y79 214 aaKnown RBP13.13□□□□□ -0.31
TGFB3-204ENST00000556285 MAP7D3Q8IWC1 876 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 UNC5BQ8IZJ1 945 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 CTNNBL1Q8WYA6 563 aaPredicted RBP13.13□□□□□ -0.31
TGFB3-204ENST00000556285 RTP4Q96DX8 246 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 PLEKHG4BQ96PX9 1271 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 DPYSL5Q9BPU6 564 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 OR2AG1Q9H205 316 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 PILRAQ9UKJ1 303 aa13.13□□□□□ -0.31
TGFB3-204ENST00000556285 TNRC6AQ8NDV7 1962 aaKnown RBP13.12□□□□□ -0.31
TGFB3-204ENST00000556285 NKX2-8O15522 239 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 MTX2O75431 263 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 F3P13726 295 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 MAN1A1P33908 653 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 MC2RQ01718 297 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 AP1B1Q10567 949 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 PCSK7Q16549 785 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 KHDC1Q4VXA5 237 aaKnown RBP13.12□□□□□ -0.31
TGFB3-204ENST00000556285 TMC3Q7Z5M5 1100 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 ADGRG6Q86SQ4 1221 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 RAVER1Q8IY67 606 aaKnown RBP13.12□□□□□ -0.31
TGFB3-204ENST00000556285 CCDC112Q8NEF3 446 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 SPATA22Q8NHS9 363 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 SLC35G2Q8TBE7 412 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 CCHCR1Q8TD31 782 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 IQCDQ96DY2 449 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 IMP4Q96G21 291 aaKnown RBP13.12□□□□□ -0.31
TGFB3-204ENST00000556285 AGAP3Q96P47 875 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 SPATA16Q9BXB7 569 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 ASPSCR1Q9BZE9 553 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 CARD9Q9H257 536 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 RMI1Q9H9A7 625 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 ZFYVE1Q9HBF4 777 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 KLC4Q9NSK0 619 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 GEMIN8Q9NWZ8 242 aaKnown RBP13.12□□□□□ -0.31
TGFB3-204ENST00000556285 OGFRQ9NZT2 677 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 CPNE7Q9UBL6 633 aa13.12□□□□□ -0.31
TGFB3-204ENST00000556285 TMPRSS11EQ9UL52 423 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms