RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 BPIP17213 487 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 CDC25BP30305 580 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 PTPN7P35236 360 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 B4GALNT1Q00973 533 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 MPP3Q13368 585 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 SIRPB2Q5JXA9 342 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 ZNF648Q5T619 568 aaPredicted RBP18.23■□□□□ 0.51
NEDD1-208ENST00000555806 PHF19Q5T6S3 580 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 PEX26Q7Z412 305 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 ZNF438Q7Z4V0 828 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 PHYKPLQ8IUZ5 450 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 TMEM139Q8IV31 216 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 CDKL3Q8IVW4 592 aaPredicted RBP18.23■□□□□ 0.51
NEDD1-208ENST00000555806 LRRC57Q8N9N7 239 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 KCNE4Q8WWG9 221 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 PRR11Q96HE9 360 aaPredicted RBP18.23■□□□□ 0.51
NEDD1-208ENST00000555806 MRGPRX2Q96LB1 330 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 FSD1LQ9BXM9 530 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 OR2AG1Q9H205 316 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 CARD9Q9H257 536 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 ATXN10Q9UBB4 475 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 KCNK6Q9Y257 313 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 EFR3BQ9Y2G0 817 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 KIF26BQ2KJY2 2108 aa18.23■□□□□ 0.51
NEDD1-208ENST00000555806 TRBV23OR9-2A0A075B6M9 112 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 GRID2O43424 1007 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 NUAK1O60285 661 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 CPNE6O95741 557 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 EPOP01588 193 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 PTMAP06454 111 aaKnown RBP18.22■□□□□ 0.51
NEDD1-208ENST00000555806 JMJD7P0C870 316 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 HGFP14210 728 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 ZNF8P17098 575 aaPredicted RBP18.22■□□□□ 0.51
NEDD1-208ENST00000555806 HLA-DPA1P20036 260 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 MLLT3P42568 568 aaPredicted RBP18.22■□□□□ 0.51
NEDD1-208ENST00000555806 CHRNA4P43681 627 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 PPM1FP49593 454 aaPredicted RBP18.22■□□□□ 0.51
NEDD1-208ENST00000555806 EIF3EP60228 445 aaKnown RBP18.22■□□□□ 0.51
NEDD1-208ENST00000555806 KIF5AQ12840 1032 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 PDPK2PQ6A1A2 396 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 ITPRIPL1Q6GPH6 555 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 AADACL2Q6P093 401 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 PIM3Q86V86 326 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 JAMLQ86YT9 394 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 SYCE1Q8N0S2 351 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 BLOC1S5Q8TDH9 187 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 ALG3Q92685 438 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 GLYATL1Q969I3 302 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 FAM118BQ9BPY3 351 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 ZMYND15Q9H091 742 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 GBA3Q9H227 469 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 TRABDQ9H4I3 376 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 RDH14Q9HBH5 336 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 TRIM10Q9UDY6 481 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 LOXL2Q9Y4K0 774 aa18.22■□□□□ 0.51
NEDD1-208ENST00000555806 ZFC3H1O60293 1989 aaKnown RBP18.21■□□□□ 0.51
NEDD1-208ENST00000555806 PPM1DO15297 605 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 SNX2O60749 519 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 STK10O94804 968 aaKnown RBP18.21■□□□□ 0.51
NEDD1-208ENST00000555806 TJP3O95049 919 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 ITGA2BP08514 1039 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 RBP3P10745 1247 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 PYGMP11217 842 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 UGT1A5P35504 534 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 GPR3P46089 330 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 GEMP55040 296 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 TLE3Q04726 772 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 NR1D2Q14995 579 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 SLC1A5Q15758 541 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 BROXQ5VW32 411 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 DARS2Q6PI48 645 aaKnown RBP18.21■□□□□ 0.51
NEDD1-208ENST00000555806 CRTC3Q6UUV7 619 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 USP53Q70EK8 1073 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 TMPRSS9Q7Z410 1059 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 UBL4BQ8N7F7 174 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 SLC37A2Q8TED4 501 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 TRIM39Q9HCM9 518 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 KCNK4Q9NYG8 393 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 HACD3Q9P035 362 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 PISDQ9UG56 409 aa18.21■□□□□ 0.51
NEDD1-208ENST00000555806 UNC13CQ8NB66 2214 aa18.21■□□□□ 0.5
NEDD1-208ENST00000555806 SCN8AQ9UQD0 1980 aa18.21■□□□□ 0.5
NEDD1-208ENST00000555806 A0A0U1RQJ8 604 aa18.2■□□□□ 0.5
NEDD1-208ENST00000555806 CDRT15L2A8MXV6 281 aa18.2■□□□□ 0.5
NEDD1-208ENST00000555806 KCNN4O15554 427 aa18.2■□□□□ 0.5
NEDD1-208ENST00000555806 KLK10O43240 276 aa18.2■□□□□ 0.5
NEDD1-208ENST00000555806 MTX2O75431 263 aa18.2■□□□□ 0.5
NEDD1-208ENST00000555806 EML2O95834 649 aa18.2■□□□□ 0.5
NEDD1-208ENST00000555806 HMGCLP35914 325 aa18.2■□□□□ 0.5
NEDD1-208ENST00000555806 ZFP36L1Q07352 338 aaKnown RBP18.2■□□□□ 0.5
NEDD1-208ENST00000555806 PLA2G4EQ3MJ16 856 aa18.2■□□□□ 0.5
NEDD1-208ENST00000555806 NKAIN2Q5VXU1 208 aa18.2■□□□□ 0.5
NEDD1-208ENST00000555806 GLT6D1Q7Z4J2 308 aa18.2■□□□□ 0.5
NEDD1-208ENST00000555806 ADGRG6Q86SQ4 1221 aa18.2■□□□□ 0.5
NEDD1-208ENST00000555806 ZNF761Q86XN6 746 aaPredicted RBP18.2■□□□□ 0.5
NEDD1-208ENST00000555806 SLITRK4Q8IW52 837 aa18.2■□□□□ 0.5
NEDD1-208ENST00000555806 TTC30BQ8N4P2 665 aa18.2■□□□□ 0.5
NEDD1-208ENST00000555806 GDAP1Q8TB36 358 aa18.2■□□□□ 0.5
NEDD1-208ENST00000555806 FCRL3Q96P31 734 aaPredicted RBP18.2■□□□□ 0.5
NEDD1-208ENST00000555806 PLEKHG4BQ96PX9 1271 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms