RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 SERPINA9Q86WD7 417 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 HEATR4Q86WZ0 1026 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 CILP2Q8IUL8 1156 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 PIANPQ8IYJ0 282 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 UNC5BQ8IZJ1 945 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 CNPY4Q8N129 248 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 PELI3Q8N2H9 469 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 NXPE1Q8N323 547 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 DDHD1Q8NEL9 900 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 FBF1Q8TES7 1133 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 KLHDC7BQ96G42 594 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 COX14Q96I36 57 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 COPS8Q99627 209 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 ZCCHC2Q9C0B9 1178 aaKnown RBP12.36□□□□□ -0.43
SHMT2-221ENST00000555773 MIR1-1HGQ9H1L0 117 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 FAM96AQ9H5X1 160 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 TM9SF3Q9HD45 589 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 IARS2Q9NSE4 1012 aaKnown RBP12.36□□□□□ -0.43
SHMT2-221ENST00000555773 INTS10Q9NVR2 710 aaKnown RBP12.36□□□□□ -0.43
SHMT2-221ENST00000555773 ARGLU1Q9NWB6 273 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-221ENST00000555773 ZDHHC3Q9NYG2 299 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 ZFATQ9P243 1243 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 FBXO5Q9UKT4 447 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 TMPRSS11EQ9UL52 423 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 TRPM6Q9BX84 2022 aa12.36□□□□□ -0.43
SHMT2-221ENST00000555773 GON4LQ3T8J9 2241 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 ZNF318Q5VUA4 2279 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 IGLV3-16A0A075B6K0 115 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 A0A1B0GTW7 788 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 A0A1W2PR77 199 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 GPR89AB7ZAQ6 455 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 CFAP99D6REC4 459 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 GOLGA8KD6RF30 607 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 F8W8V4 182 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 GOLGA8TH3BQL2 631 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 BCAT2O15382 392 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-221ENST00000555773 VEGFDO43915 354 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 NDUFS3O75489 264 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 GPR89BP0CG08 455 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 MYCLP1P12525 358 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-221ENST00000555773 ZNF7P17097 686 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-221ENST00000555773 ITPKAP23677 461 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 ACRV1P26436 265 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 LEPRP48357 1165 aaKnown RBP12.35□□□□□ -0.43
SHMT2-221ENST00000555773 CDKN1CP49918 316 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-221ENST00000555773 AFF3P51826 1226 aaKnown RBP12.35□□□□□ -0.43
SHMT2-221ENST00000555773 KIAA1024LP59773 190 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 TCF15Q12870 199 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 SLC29A2Q14542 456 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 TEAD4Q15561 434 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 TYSND1Q2T9J0 566 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 GPRC6AQ5T6X5 926 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 ZNF470Q6ECI4 717 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 PSAPL1Q6NUJ1 521 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 PRR23BQ6ZRT6 265 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 ARMCX6Q7L4S7 300 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 LRRC6Q86X45 466 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 SYT12Q8IV01 421 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 RBFAQ8N0V3 343 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 OTUD6BQ8N6M0 293 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 C2CD4AQ8NCU7 369 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-221ENST00000555773 CEP76Q8TAP6 659 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 GDAP1Q8TB36 358 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 UBLCP1Q8WVY7 318 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-221ENST00000555773 FUBP1Q96AE4 644 aaKnown RBP12.35□□□□□ -0.43
SHMT2-221ENST00000555773 DCUN1D1Q96GG9 259 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 SLC6A18Q96N87 628 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 MYOCQ99972 504 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 ACSS3Q9H6R3 686 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 VPS18Q9P253 973 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 MARCH4Q9P2E8 410 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-221ENST00000555773 RABGEF1Q9UJ41 708 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 PILRBQ9UKJ0 227 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 RAB23Q9ULC3 237 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 OR1A2Q9Y585 309 aa12.35□□□□□ -0.43
SHMT2-221ENST00000555773 ABCA7Q8IZY2 2146 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 H0Y8X5 98 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 TLR4O00206 839 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 QSOX1O00391 747 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 TNFRSF10CO14798 259 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 VILLO15195 856 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 INPP4BO15327 924 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 CDK14O94921 469 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 AP2A2O94973 939 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 S1PR4O95977 384 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 C1QAP02745 245 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 THEGLP0DJG4 465 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 MSH3P20585 1137 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 HSD17B3P37058 310 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 NSG1P42857 185 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 THOP1P52888 689 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 ADARP55265 1226 aaKnown RBP12.34□□□□□ -0.43
SHMT2-221ENST00000555773 TMEM115Q12893 351 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-221ENST00000555773 CTBP1Q13363 440 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 NFATC4Q14934 902 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 DBN1Q16643 649 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 KLHL38Q2WGJ6 581 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 KBTBD12Q3ZCT8 623 aa12.34□□□□□ -0.43
SHMT2-221ENST00000555773 BEND6Q5SZJ8 279 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-221ENST00000555773 PEAR1Q5VY43 1037 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms