RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 ZRANB2O95218 330 aaKnown RBP eCLIP15.27■□□□□ 0.04
SNX6-205ENST00000555648 IPO7O95373 1038 aaKnown RBP15.27■□□□□ 0.04
SNX6-205ENST00000555648 NDST3O95803 873 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 CCL4P13236 92 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 MPSTP25325 297 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 CYLC1P35663 651 aaPredicted RBP15.27■□□□□ 0.04
SNX6-205ENST00000555648 MAPK9P45984 424 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 ATP1A2P50993 1020 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 TCEAL1Q15170 157 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 LLGL1Q15334 1064 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 SNAP47Q5SQN1 464 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 CCDC181Q5TID7 509 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 KIAA1614Q5VZ46 1190 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 PDPK2PQ6A1A2 396 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 TMEM71Q6P5X7 295 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 ZNF605Q86T29 641 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 ZFAND4Q86XD8 727 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 ZNF761Q86XN6 746 aaPredicted RBP15.27■□□□□ 0.04
SNX6-205ENST00000555648 FAM129CQ86XR2 697 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 TRAM1L1Q8N609 369 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 SPATA22Q8NHS9 363 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 WDR24Q96S15 920 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 FERMT1Q9BQL6 677 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 ARHGAP9Q9BRR9 750 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 B3GNT4Q9C0J1 378 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 OR2AG1Q9H205 316 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 TRIM39Q9HCM9 518 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 SARS2Q9NP81 518 aaKnown RBP15.27■□□□□ 0.04
SNX6-205ENST00000555648 UBP1Q9NZI7 540 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 FOXJ2Q9P0K8 574 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 TBC1D29Q9UFV1 150 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 FAM153AQ9UHL3 310 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 SSUH2Q9Y2M2 353 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 ALG6Q9Y672 507 aa15.27■□□□□ 0.04
SNX6-205ENST00000555648 PTPRQQ9UMZ3 2332 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 KIR2DS5A0A0G2JLQ3 304 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 A0A0G2JNG1 304 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 GPR89AB7ZAQ6 455 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 C9orf172C9J069 976 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 STMND1H3BQB6 276 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 KIR2DS3K7RE56 304 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 MT-CYBP00156 380 aaPredicted RBP15.26■□□□□ 0.03
SNX6-205ENST00000555648 GPR89BP0CG08 455 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 ZNF8P17098 575 aaPredicted RBP15.26■□□□□ 0.03
SNX6-205ENST00000555648 PTPN3P26045 913 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 CDKN2BP42772 138 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 NAP1L1P55209 391 aaKnown RBP15.26■□□□□ 0.03
SNX6-205ENST00000555648 DCDC1P59894 354 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 SQSTM1Q13501 440 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 GTF2H3Q13889 308 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 KIR2DS5Q14953 304 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 INSCQ1MX18 579 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 TFDP3Q5H9I0 405 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 IYDQ6PHW0 289 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 CRTC3Q6UUV7 619 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 SPOCD1Q6ZMY3 1216 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 ZNF574Q6ZN55 896 aaPredicted RBP15.26■□□□□ 0.03
SNX6-205ENST00000555648 TMC3Q7Z5M5 1100 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 ZC3H18Q86VM9 953 aaKnown RBP15.26■□□□□ 0.03
SNX6-205ENST00000555648 TRIM48Q8IWZ4 208 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 RCOR2Q8IZ40 523 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 GDAP1Q8TB36 358 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 NCSTNQ92542 709 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 GLYATL1Q969I3 302 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 SGF29Q96ES7 293 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 RBM41Q96IZ5 413 aaKnown RBP15.26■□□□□ 0.03
SNX6-205ENST00000555648 TEKT5Q96M29 485 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 TRIB3Q96RU7 358 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 ARFGAP3Q9NP61 516 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 KLC4Q9NSK0 619 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 SLC39A1Q9NY26 324 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 ATXN10Q9UBB4 475 aa15.26■□□□□ 0.03
SNX6-205ENST00000555648 SAE1Q9UBE0 346 aaPredicted RBP15.26■□□□□ 0.03
SNX6-205ENST00000555648 LRP4O75096 1905 aa15.25■□□□□ 0.03
SNX6-205ENST00000555648 EFCAB7A8K855 629 aa15.25■□□□□ 0.03
SNX6-205ENST00000555648 PDZK1P1A8MUH7 402 aa15.25■□□□□ 0.03
SNX6-205ENST00000555648 THRAP10827 490 aa15.25■□□□□ 0.03
SNX6-205ENST00000555648 F3P13726 295 aa15.25■□□□□ 0.03
SNX6-205ENST00000555648 VCLP18206 1134 aa15.25■□□□□ 0.03
SNX6-205ENST00000555648 TBX2Q13207 712 aaPredicted RBP15.25■□□□□ 0.03
SNX6-205ENST00000555648 PRKD1Q15139 912 aaPredicted RBP15.25■□□□□ 0.03
SNX6-205ENST00000555648 FAM182AQ5T1J6 154 aa15.25■□□□□ 0.03
SNX6-205ENST00000555648 ZDHHC20Q5W0Z9 365 aa15.25■□□□□ 0.03
SNX6-205ENST00000555648 PID1Q7Z2X4 250 aa15.25■□□□□ 0.03
SNX6-205ENST00000555648 CCDC170Q8IYT3 715 aa15.25■□□□□ 0.03
SNX6-205ENST00000555648 ZNF843Q8N446 348 aa15.25■□□□□ 0.03
SNX6-205ENST00000555648 GPR26Q8NDV2 337 aa15.25■□□□□ 0.03
SNX6-205ENST00000555648 ART4Q93070 314 aa15.25■□□□□ 0.03
SNX6-205ENST00000555648 TTC25Q96NG3 672 aa15.25■□□□□ 0.03
SNX6-205ENST00000555648 VAT1Q99536 393 aa15.25■□□□□ 0.03
SNX6-205ENST00000555648 ASPSCR1Q9BZE9 553 aa15.25■□□□□ 0.03
SNX6-205ENST00000555648 EPB41L1Q9H4G0 881 aa15.25■□□□□ 0.03
SNX6-205ENST00000555648 PCDHA13Q9Y5I0 950 aa15.25■□□□□ 0.03
SNX6-205ENST00000555648 CELSR3Q9NYQ7 3312 aa15.24■□□□□ 0.03
SNX6-205ENST00000555648 SHROOM3Q8TF72 1996 aa15.24■□□□□ 0.03
SNX6-205ENST00000555648 A8MU76 341 aa15.24■□□□□ 0.03
SNX6-205ENST00000555648 KMOO15229 486 aa15.24■□□□□ 0.03
SNX6-205ENST00000555648 EFSO43281 561 aa15.24■□□□□ 0.03
SNX6-205ENST00000555648 VEGFDO43915 354 aa15.24■□□□□ 0.03
SNX6-205ENST00000555648 C1QL1O75973 258 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms