RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 NUAK1O60285 661 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 EML2O95834 649 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 ACP5P13686 325 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 NFKB1P19838 968 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 CD68P34810 354 aaPredicted RBP13.67□□□□□ -0.22
PCNX4-209ENST00000555569 ETV5P41161 510 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 FASLGP48023 281 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 VAC14Q08AM6 782 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 C16orf72Q14CZ0 275 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 PDPK2PQ6A1A2 396 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 ZNF574Q6ZN55 896 aaPredicted RBP13.67□□□□□ -0.22
PCNX4-209ENST00000555569 DAAM2Q86T65 1068 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 ZC3H18Q86VM9 953 aaKnown RBP13.67□□□□□ -0.22
PCNX4-209ENST00000555569 SFRP1Q8N474 314 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 TRAM1L1Q8N609 369 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 KRT35Q92764 455 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 HAUS1Q96CS2 278 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 MRFAP1L1Q96HT8 127 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 DPYSL5Q9BPU6 564 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 OR2AG1Q9H205 316 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 ARFGAP3Q9NP61 516 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 KCNK4Q9NYG8 393 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 ATXN10Q9UBB4 475 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 ACSL6Q9UKU0 697 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 KCNK6Q9Y257 313 aa13.67□□□□□ -0.22
PCNX4-209ENST00000555569 SMG1Q96Q15 3661 aaKnown RBP13.66□□□□□ -0.22
PCNX4-209ENST00000555569 IGHV5-10-1A0A0J9YXX1 117 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 SOWAHDA6NJG2 315 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 HACD1B0YJ81 288 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 TK2O00142 265 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 HGSO14964 777 aaPredicted RBP13.66□□□□□ -0.22
PCNX4-209ENST00000555569 SLC25A14O95258 325 aaPredicted RBP13.66□□□□□ -0.22
PCNX4-209ENST00000555569 NDUFA10O95299 355 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 ZNF8P17098 575 aaPredicted RBP13.66□□□□□ -0.22
PCNX4-209ENST00000555569 BPIP17213 487 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 FECHP22830 423 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 LIMK2P53671 638 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 MAPK10P53779 464 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 WNT3AP56704 352 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 SQSTM1Q13501 440 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 TRA2AQ13595 282 aaKnown RBP eCLIP13.66□□□□□ -0.22
PCNX4-209ENST00000555569 PPP2R5EQ16537 467 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.66□□□□□ -0.22
PCNX4-209ENST00000555569 ZNF648Q5T619 568 aaPredicted RBP13.66□□□□□ -0.22
PCNX4-209ENST00000555569 NKAIN2Q5VXU1 208 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 KDELC1Q6UW63 502 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 BBS12Q6ZW61 710 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 PID1Q7Z2X4 250 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 TMTC1Q8IUR5 882 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 LSM14AQ8ND56 463 aaKnown RBP13.66□□□□□ -0.22
PCNX4-209ENST00000555569 OR4D9Q8NGE8 314 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 SNRNP27Q8WVK2 155 aaKnown RBP13.66□□□□□ -0.22
PCNX4-209ENST00000555569 SLC39A7Q92504 469 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 USP7Q93009 1102 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 GLYATL1Q969I3 302 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 CCDC74BQ96LY2 380 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 QKIQ96PU8 341 aaKnown RBP eCLIP13.66□□□□□ -0.222e-7■□□□□ 8.2
PCNX4-209ENST00000555569 VAT1Q99536 393 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 SLC38A3Q99624 504 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 HERPUD2Q9BSE4 406 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 RBSNQ9H1K0 784 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 TRIM39Q9HCM9 518 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 KLHL8Q9P2G9 620 aaPredicted RBP13.66□□□□□ -0.22
PCNX4-209ENST00000555569 TBC1D29Q9UFV1 150 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 SPO11Q9Y5K1 396 aa13.66□□□□□ -0.22
PCNX4-209ENST00000555569 EPN1Q9Y6I3 576 aaPredicted RBP13.66□□□□□ -0.22
PCNX4-209ENST00000555569 PRAMEF33A0A0G2JMD5 474 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 LOC285095A0A1B0GVY8 99 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 RCCD1A6NED2 376 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 K7ENP7 123 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 AURKAO14965 403 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 SNX2O60749 519 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 PRAMEF10O60809 474 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 IPO7O95373 1038 aaKnown RBP13.65□□□□□ -0.22
PCNX4-209ENST00000555569 SLC2A4P14672 509 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 CSF2RBP32927 897 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 TNNT3P45378 269 aaPredicted RBP13.65□□□□□ -0.22
PCNX4-209ENST00000555569 COPS2P61201 443 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 GPLD1P80108 840 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 RHDQ02161 417 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 HHEXQ03014 270 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 CFHR1Q03591 330 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 IYDQ6PHW0 289 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 INO80CQ6PI98 192 aaPredicted RBP13.65□□□□□ -0.22
PCNX4-209ENST00000555569 CCDC81Q6ZN84 652 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 ADGRG6Q86SQ4 1221 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 ZNF761Q86XN6 746 aaPredicted RBP13.65□□□□□ -0.22
PCNX4-209ENST00000555569 PHYKPLQ8IUZ5 450 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 ZNF567Q8N184 647 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 RCBTB1Q8NDN9 531 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 OR10G6Q8NH81 332 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 HTR3CQ8WXA8 447 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 AHCYL2Q96HN2 611 aaKnown RBP13.65□□□□□ -0.22
PCNX4-209ENST00000555569 CALR3Q96L12 384 aaKnown RBP13.65□□□□□ -0.22
PCNX4-209ENST00000555569 FCRL5Q96RD9 977 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 CCNL2Q96S94 520 aaPredicted RBP13.65□□□□□ -0.22
PCNX4-209ENST00000555569 HEMGNQ9BXL5 484 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 TRABDQ9H4I3 376 aa13.65□□□□□ -0.22
PCNX4-209ENST00000555569 STN1Q9H668 368 aaKnown RBP13.65□□□□□ -0.22
PCNX4-209ENST00000555569 BPIFA1Q9NP55 256 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms