RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 DNAAF4Q8WXU2 420 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 ABHD1Q96SE0 405 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 RTN4RQ9BZR6 473 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 DNAJC18Q9H819 358 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 MRPL44Q9H9J2 332 aaKnown RBP5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 LOXL2Q9Y4K0 774 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 hCG_1809904A0A1W2PP81 198 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 A0A1W2PPE2 198 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 A0A1W2PR64 198 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 LINC01553A4QN01 128 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 PRSS2P07478 247 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 SRCP12931 536 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 PCYT1AP49585 367 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 SUOXP51687 545 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 TMF1P82094 1093 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 AIMP1Q12904 312 aaKnown RBP5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 GRAPQ13588 217 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 PLCB4Q15147 1175 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 HLFQ16534 295 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 FAM133BQ5BKY9 247 aaKnown RBP5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 IGSF11Q5DX21 431 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 NSUN5P2Q63ZY6 315 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 LCN10Q6JVE6 187 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 WDR73Q6P4I2 378 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 PAPD4Q6PIY7 484 aaKnown RBP5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 CHERPQ8IWX8 916 aaKnown RBP5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 POGLUT1Q8NBL1 392 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 ZNF622Q969S3 477 aaKnown RBP eCLIP5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 VOPP1Q96AW1 172 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 TMCO6Q96DC7 493 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 OR1F2PQ96R84 312 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 KLHL4Q9C0H6 718 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 PCDH9Q9HC56 1237 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 NOX4Q9NPH5 578 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 MCM9Q9NXL9 1143 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 RNF7Q9UBF6 113 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 PCDHA7Q9UN72 937 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 ZNF148Q9UQR1 794 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 SNX9Q9Y5X1 595 aa5.37□□□□□ -1.55
CKS1BP1-201ENST00000555221 TMEM8BA6NDV4 472 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 KCNN4O15554 427 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 ZNF500O60304 480 aaPredicted RBP5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 RFPL2O75678 378 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 RSL1D1O76021 490 aaKnown RBP5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 ABCB1P08183 1280 aaPredicted RBP5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 PRLRP16471 622 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 UGT1A1P22309 533 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 LMO1P25800 156 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 APOBEC1P41238 236 aaKnown RBP5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 PEX5P50542 639 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 MVPQ14764 893 aaKnown RBP5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 OASLQ15646 514 aaKnown RBP5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 DLG2Q15700 870 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 CALCRLQ16602 461 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 KCNT1Q5JUK3 1230 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 PAPPA-AS1Q5QFB9 102 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 ZNF280DQ6N043 979 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 RGMBQ6NW40 437 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 ZNF549Q6P9A3 640 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 BRAT1Q6PJG6 821 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 CCNI2Q6ZMN8 369 aaPredicted RBP5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 TPRG1Q6ZUI0 275 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 AACSQ86V21 672 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 GPR180Q86V85 440 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 NRROSQ86YC3 692 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 PELI3Q8N2H9 469 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 GSDMBQ8TAX9 411 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 PTPMT1Q8WUK0 201 aaPredicted RBP5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 CNDP2Q96KP4 475 aaKnown RBP5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 BAG1Q99933 345 aaPredicted RBP5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 MMP27Q9H306 513 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 DENND2DQ9H6A0 471 aaPredicted RBP5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 TRMT1Q9NXH9 659 aaKnown RBP5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 AMACRQ9UHK6 382 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 FBXL2Q9UKC9 423 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 ZNF711Q9Y462 761 aa5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 TMEM184BQ9Y519 407 aaPredicted RBP5.36□□□□□ -1.55
CKS1BP1-201ENST00000555221 LOC102723996A0A087X1L8 192 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 GPR75-ASB3A0A0A6YYF3 556 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 ANKRD28O15084 1053 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 VPREB1P12018 145 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 SSTR2P30874 369 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 MATR3P43243 847 aaKnown RBP eCLIP5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 CAPZA2P47755 286 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 EGR4Q05215 589 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 SPOCK1Q08629 439 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 DHX34Q14147 1143 aaKnown RBP5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 KRT33BQ14525 404 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 XKR9Q5GH70 373 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 C9orf152Q5JTZ5 239 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 ADALQ6DHV7 355 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 DHRS7BQ6IAN0 325 aaPredicted RBP5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 RPUSD3Q6P087 351 aaKnown RBP5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 PDXDC1Q6P996 788 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 GLCCI1Q86VQ1 547 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 FBXL14Q8N1E6 418 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 RASGEF1CQ8N431 466 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 GUF1Q8N442 669 aaKnown RBP5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 EMC1Q8N766 993 aa5.35□□□□□ -1.55
CKS1BP1-201ENST00000555221 OR2AK2Q8NG84 335 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms