RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 VPS39Q96JC1 886 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 MRGPRX1Q96LB2 322 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 PSKH2Q96QS6 385 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 EBF4Q9BQW3 602 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 CD93Q9NPY3 652 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 SUN2Q9UH99 717 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 SARDHQ9UL12 918 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 KNL1Q8NG31 2342 aa17.3■□□□□ 0.36
SHOX-204ENST00000554971 SLCO1B7G3V0H7 640 aa17.3■□□□□ 0.36
SHOX-204ENST00000554971 G3V2L1 256 aa17.3■□□□□ 0.36
SHOX-204ENST00000554971 SYNCRIPO60506 623 aaKnown RBP17.3■□□□□ 0.36
SHOX-204ENST00000554971 USP12O75317 370 aa17.3■□□□□ 0.36
SHOX-204ENST00000554971 GKP32189 559 aa17.3■□□□□ 0.36
SHOX-204ENST00000554971 METAP1P53582 386 aa17.3■□□□□ 0.36
SHOX-204ENST00000554971 ACTR3P61158 418 aa17.3■□□□□ 0.36
SHOX-204ENST00000554971 ELAVL3Q14576 367 aaKnown RBP17.3■□□□□ 0.36
SHOX-204ENST00000554971 RCN1Q15293 331 aa17.3■□□□□ 0.36
SHOX-204ENST00000554971 AAGABQ6PD74 315 aa17.3■□□□□ 0.36
SHOX-204ENST00000554971 CNTD1Q8N815 330 aa17.3■□□□□ 0.36
SHOX-204ENST00000554971 TBL1YQ9BQ87 522 aa17.3■□□□□ 0.36
SHOX-204ENST00000554971 RSPH9Q9H1X1 276 aaPredicted RBP17.3■□□□□ 0.36
SHOX-204ENST00000554971 GLOD4Q9HC38 313 aa17.3■□□□□ 0.36
SHOX-204ENST00000554971 CHRAC1Q9NRG0 131 aa17.3■□□□□ 0.36
SHOX-204ENST00000554971 SLC8A2Q9UPR5 921 aa17.3■□□□□ 0.36
SHOX-204ENST00000554971 WASF2Q9Y6W5 498 aa17.3■□□□□ 0.36
SHOX-204ENST00000554971 TTC24A2A3L6 582 aaPredicted RBP17.29■□□□□ 0.36
SHOX-204ENST00000554971 SLC22A2O15244 555 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 NVLO15381 856 aaKnown RBP17.29■□□□□ 0.36
SHOX-204ENST00000554971 FKBP6O75344 327 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 LYPLA1O75608 230 aaPredicted RBP17.29■□□□□ 0.36
SHOX-204ENST00000554971 ADSLP30566 484 aaPredicted RBP17.29■□□□□ 0.36
SHOX-204ENST00000554971 CCNHP51946 323 aaPredicted RBP17.29■□□□□ 0.36
SHOX-204ENST00000554971 RHOAP61586 193 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 ITGA9Q13797 1035 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 RCN2Q14257 317 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 IHHQ14623 411 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 RFTN1Q14699 578 aaPredicted RBP17.29■□□□□ 0.36
SHOX-204ENST00000554971 EPGNQ6UW88 154 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 METTL3Q86U44 580 aaKnown RBP17.29■□□□□ 0.36
SHOX-204ENST00000554971 ZC3HC1Q86WB0 502 aaKnown RBP17.29■□□□□ 0.36
SHOX-204ENST00000554971 APLFQ8IW19 511 aaPredicted RBP17.29■□□□□ 0.36
SHOX-204ENST00000554971 ULK2Q8IYT8 1036 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 TSTD1Q8NFU3 115 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 OR2AP1Q8NGE2 309 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 OR2T3Q8NH03 318 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 HMGB4Q8WW32 186 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 AGAP2Q99490 1192 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 CDH19Q9H159 772 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 IARS2Q9NSE4 1012 aaKnown RBP17.29■□□□□ 0.36
SHOX-204ENST00000554971 OXSMQ9NWU1 459 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 H0Y3Z8 333 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 INSIG1O15503 277 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 LAMTOR5O43504 91 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 HSPA4LO95757 839 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 PAMP19021 973 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 CR2P20023 1033 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 CPOXP36551 454 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 MAXP61244 160 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 BLMHQ13867 455 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 NAA25Q14CX7 972 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 CARD16Q5EG05 197 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 MARC1Q5VT66 337 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 ZYG11AQ6WRX3 759 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 CMC1Q7Z7K0 106 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 PLPP6Q8IY26 295 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 MGME1Q9BQP7 344 aa17.29■□□□□ 0.36
SHOX-204ENST00000554971 ILKAPQ9H0C8 392 aaPredicted RBP17.29■□□□□ 0.36
SHOX-204ENST00000554971 HLA-DQB2P05538 268 aa17.28■□□□□ 0.36
SHOX-204ENST00000554971 CRABP2P29373 138 aa17.28■□□□□ 0.36
SHOX-204ENST00000554971 MXRA7P84157 204 aa17.28■□□□□ 0.36
SHOX-204ENST00000554971 MUM1Q2TAK8 710 aa17.28■□□□□ 0.36
SHOX-204ENST00000554971 CFAP157Q5JU67 520 aa17.28■□□□□ 0.36
SHOX-204ENST00000554971 ADGRG6Q86SQ4 1221 aa17.28■□□□□ 0.36
SHOX-204ENST00000554971 MMAAQ8IVH4 418 aaKnown RBP17.28■□□□□ 0.36
SHOX-204ENST00000554971 CAMKK1Q8N5S9 505 aa17.28■□□□□ 0.36
SHOX-204ENST00000554971 GPATCH11Q8N954 259 aa17.28■□□□□ 0.36
SHOX-204ENST00000554971 PPHLN1Q8NEY8 458 aaKnown RBP17.28■□□□□ 0.36
SHOX-204ENST00000554971 WDR60Q8WVS4 1066 aa17.28■□□□□ 0.36
SHOX-204ENST00000554971 CINPQ9BW66 212 aaPredicted RBP17.28■□□□□ 0.36
SHOX-204ENST00000554971 POLMQ9NP87 494 aaPredicted RBP17.28■□□□□ 0.36
SHOX-204ENST00000554971 PNPOQ9NVS9 261 aa17.28■□□□□ 0.36
SHOX-204ENST00000554971 VTI1BQ9UEU0 232 aa17.28■□□□□ 0.36
SHOX-204ENST00000554971 SEPT3Q9UH03 358 aa17.28■□□□□ 0.36
SHOX-204ENST00000554971 EBF1Q9UH73 591 aa17.28■□□□□ 0.36
SHOX-204ENST00000554971 PPM1HQ9ULR3 514 aa17.28■□□□□ 0.36
SHOX-204ENST00000554971 ZNF292O60281 2723 aa17.28■□□□□ 0.36
SHOX-204ENST00000554971 CEP192Q8TEP8 1941 aa17.28■□□□□ 0.36
SHOX-204ENST00000554971 APBB3O95704 486 aa17.27■□□□□ 0.36
SHOX-204ENST00000554971 NMBRP28336 390 aa17.27■□□□□ 0.36
SHOX-204ENST00000554971 RENBPP51606 427 aa17.27■□□□□ 0.36
SHOX-204ENST00000554971 KPNA2P52292 529 aaKnown RBP17.27■□□□□ 0.36
SHOX-204ENST00000554971 RPS14P62263 151 aaKnown RBP17.27■□□□□ 0.36
SHOX-204ENST00000554971 AP2B1P63010 937 aa17.27■□□□□ 0.36
SHOX-204ENST00000554971 THOC5Q13769 683 aaKnown RBP17.27■□□□□ 0.36
SHOX-204ENST00000554971 ZNF235Q14590 738 aa17.27■□□□□ 0.36
SHOX-204ENST00000554971 ANGPT1Q15389 498 aa17.27■□□□□ 0.36
SHOX-204ENST00000554971 KIAA0408Q6ZU52 694 aa17.27■□□□□ 0.36
SHOX-204ENST00000554971 MYLK4Q86YV6 388 aaPredicted RBP17.27■□□□□ 0.36
SHOX-204ENST00000554971 PLD6Q8N2A8 252 aaKnown RBP17.27■□□□□ 0.36
SHOX-204ENST00000554971 GRIN3AQ8TCU5 1115 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms