RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 UBE2CO00762 179 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 ACOT8O14734 319 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 HSPA12AO43301 675 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 PLRG1O43660 514 aaKnown RBP3.11□□□□□ -1.91
SCFD1-213ENST00000554776 DKC1O60832 514 aaKnown RBP eCLIP3.11□□□□□ -1.91
SCFD1-213ENST00000554776 PSMD10O75832 226 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 NDUFB4O95168 129 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 CH25HO95992 272 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 BCL10O95999 233 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 EGFP01133 1207 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 PRSS2P07478 247 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 TGFB3P10600 412 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 FGF3P11487 239 aaPredicted RBP3.11□□□□□ -1.91
SCFD1-213ENST00000554776 TRIM21P19474 475 aaKnown RBP3.11□□□□□ -1.91
SCFD1-213ENST00000554776 C21orf33P30042 268 aaPredicted RBP3.11□□□□□ -1.91
SCFD1-213ENST00000554776 RPL3P39023 403 aaKnown RBP3.11□□□□□ -1.91
SCFD1-213ENST00000554776 PRCPP42785 496 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 MSH2P43246 934 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 ECT2LQ008S8 904 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 TRAF2Q12933 501 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 TNFAIP1Q13829 316 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 KCNC3Q14003 757 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 ADIPOQQ15848 244 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 PNLIPRP3Q17RR3 467 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 EFHC1Q5JVL4 640 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 FAM69BQ5VUD6 431 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 NADSYN1Q6IA69 706 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 TYW3Q6IPR3 259 aaKnown RBP3.11□□□□□ -1.91
SCFD1-213ENST00000554776 DUS1LQ6P1R4 473 aaKnown RBP3.11□□□□□ -1.91
SCFD1-213ENST00000554776 SLC36A4Q6YBV0 504 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 FJX1Q86VR8 437 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 ZC3HC1Q86WB0 502 aaKnown RBP3.11□□□□□ -1.91
SCFD1-213ENST00000554776 DNAAF5Q86Y56 855 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 FOXRED2Q8IWF2 684 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 DSELQ8IZU8 1212 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 RBMXL3Q8N7X1 1067 aaKnown RBP3.11□□□□□ -1.91
SCFD1-213ENST00000554776 Q8NFD4 153 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 HM13Q8TCT9 377 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 APBB2Q92870 758 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 TMCO6Q96DC7 493 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 LRFN5Q96NI6 719 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 CDRT15Q96T59 188 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 HAUS8Q9BT25 410 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 DNAJC18Q9H819 358 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 MMP25Q9NPA2 562 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 NOX4Q9NPH5 578 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.11□□□□□ -1.914e-7■■■■■ 32.6
SCFD1-213ENST00000554776 MRGBPQ9NV56 204 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 C5AR2Q9P296 337 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 WDR35Q9P2L0 1181 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 OR14J1Q9UGF5 321 aa3.11□□□□□ -1.91
SCFD1-213ENST00000554776 hDV102S1A0JD36 115 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 CPED1A4D0V7 1026 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 URADA6NGE7 173 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 LRRC72A6NJI9 287 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 GLOD5A6NK44 160 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 SRRM3A6NNA2 597 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-213ENST00000554776 PRR23D1E9PI22 279 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-213ENST00000554776 M0QZ24 198 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 KCNJ13O60928 360 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 AVILO75366 819 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 PAPSS2O95340 614 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-213ENST00000554776 PPP1R3DO95685 299 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 PRR23D2P0DMB1 279 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-213ENST00000554776 FCGR1AP12314 374 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 CD58P19256 250 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 MAOAP21397 527 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 GPTP24298 496 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 HNRNPH1P31943 449 aaKnown RBP3.1□□□□□ -1.91
SCFD1-213ENST00000554776 LMAN1P49257 510 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 LIG4P49917 911 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 PDLIM4P50479 330 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 GPR143P51810 404 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 SEC61A1P61619 476 aaKnown RBP3.1□□□□□ -1.91
SCFD1-213ENST00000554776 TFAP4Q01664 338 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 KIF5AQ12840 1032 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 GRAPQ13588 217 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 NFATC4Q14934 902 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 PLCB4Q15147 1175 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 KRT24Q2M2I5 525 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 PCGF3Q3KNV8 242 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 SETMARQ53H47 684 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-213ENST00000554776 ZNF805Q5CZA5 627 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 PPP6R3Q5H9R7 873 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-213ENST00000554776 C1orf141Q5JVX7 400 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 GGNBP1Q5YKI7 109 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 NSUN5P2Q63ZY6 315 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 CAPRIN2Q6IMN6 1127 aaKnown RBP3.1□□□□□ -1.91
SCFD1-213ENST00000554776 PLEKHA7Q6IQ23 1121 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 C18orf65Q6ZTR6 163 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 TAOK1Q7L7X3 1001 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 RNF168Q8IYW5 571 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-213ENST00000554776 SYT2Q8N9I0 419 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-213ENST00000554776 OR2AK2Q8NG84 335 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 LRRC59Q96AG4 307 aaKnown RBP3.1□□□□□ -1.91
SCFD1-213ENST00000554776 PTERQ96BW5 349 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 RHBDF1Q96CC6 855 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 ORAI1Q96D31 301 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 CSF3RQ99062 836 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 PCYT2Q99447 389 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms