RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 GSDMCQ9BYG8 508 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 FAM105AQ9NUU6 356 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 U3KQV3 271 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 RIMS1Q86UR5 1692 aaKnown RBP13.88□□□□□ -0.19
VTI1B-204ENST00000554659 SMIM35A0A1B0GVV1 85 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 PMM2O15305 246 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 OR5F1O95221 314 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 CCNYL3P0C7X3 344 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 KIR3DL1P43629 444 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 CREMQ03060 361 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 ZFP69Q49AA0 526 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 CXCL17Q6UXB2 119 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 AGAP2Q99490 1192 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 PDP1Q9P0J1 537 aaPredicted RBP13.88□□□□□ -0.19
VTI1B-204ENST00000554659 CLDN11O75508 207 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 TCF4P15884 667 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 RPL4P36578 427 aaKnown RBP13.88□□□□□ -0.19
VTI1B-204ENST00000554659 CCNHP51946 323 aaPredicted RBP13.88□□□□□ -0.19
VTI1B-204ENST00000554659 GMFBP60983 142 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 ITGA7Q13683 1181 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 BICRALQ6AI39 1079 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 KCTD5Q9NXV2 234 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 POMPQ9Y244 141 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 SCELO95171 688 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 NDST3O95803 873 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 TRBC1P01850 177 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 UNGP13051 313 aaPredicted RBP13.88□□□□□ -0.19
VTI1B-204ENST00000554659 FSTL1Q12841 308 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 ADGRE1Q14246 886 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 FBXO42Q6P3S6 717 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 RASSF6Q6ZTQ3 369 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 MEIOBQ8N635 442 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 PPP1R14BQ96C90 147 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 MFSD3Q96ES6 412 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 SMIM28A0A1B0GU29 152 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 C2CD4BA6NLJ0 364 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 WWP2O00308 870 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 DHFRP00374 187 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 UROSP10746 265 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 RHOQP17081 205 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 S100A1P23297 94 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 CXCR3P49682 368 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 MPP1Q00013 466 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 USP50Q70EL3 339 aaPredicted RBP13.87□□□□□ -0.19
VTI1B-204ENST00000554659 LRTOMTQ8WZ04 291 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 TIFAQ96CG3 184 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 SPACA7Q96KW9 195 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 TPK1Q9H3S4 243 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 TAS2R1Q9NYW7 299 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 FABP3P05413 133 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 FOXN2P32314 431 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 SEPHS1P49903 392 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 PTPN5P54829 565 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 AQP4P55087 323 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 CLCQ05315 142 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 RBBP4Q09028 425 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 ELP6Q0PNE2 266 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 CCNYL2Q5T2Q4 361 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 SVOPLQ8N434 492 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 OR4K2Q8NGD2 314 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 TSSK3Q96PN8 268 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 FAM240BA0A1B0GVZ2 78 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 ZNF879B4DU55 563 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 CREB1P16220 341 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 ASMTP46597 345 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 SMARCB1Q12824 385 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 CARTPTQ16568 116 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 RALGPS1Q5JS13 557 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 RFWD3Q6PCD5 774 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 CERS6Q6ZMG9 384 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 RALGPS2Q86X27 583 aaPredicted RBP13.87□□□□□ -0.19
VTI1B-204ENST00000554659 CXorf21Q9HAI6 301 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 COQ4Q9Y3A0 265 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 WASF2Q9Y6W5 498 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 PLIN4Q96Q06 1357 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 TCEA2Q15560 299 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 RFTN2Q52LD8 501 aaPredicted RBP13.87□□□□□ -0.19
VTI1B-204ENST00000554659 SDHAF4Q5VUM1 108 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 UNC5BQ8IZJ1 945 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 SLC34A3Q8N130 599 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 ZNF558Q96NG5 402 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 SLC25A51Q9H1U9 297 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 EBF3Q9H4W6 596 aa13.87□□□□□ -0.19
VTI1B-204ENST00000554659 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.86□□□□□ -0.19
VTI1B-204ENST00000554659 URADA6NGE7 173 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 CASKO14936 926 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 SLC28A2O43868 658 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 ANGPTL1O95841 491 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 L1CAMP32004 1257 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 SLC18A1P54219 525 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 YBEYP58557 167 aaPredicted RBP13.86□□□□□ -0.19
VTI1B-204ENST00000554659 SMAD3P84022 425 aaKnown RBP13.86□□□□□ -0.19
VTI1B-204ENST00000554659 NRG1Q02297 640 aaPredicted RBP13.86□□□□□ -0.19
VTI1B-204ENST00000554659 TUSC3Q13454 348 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 CLEC6AQ6EIG7 209 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 NIPA2Q8N8Q9 360 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 DNAJC11Q9NVH1 559 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 MAP10Q9P2G4 905 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 STOML2Q9UJZ1 356 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 CNTN6Q9UQ52 1028 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms