RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 M0QZQ0 153 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PDLIM1O00151 329 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 FPGTO14772 594 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 KRT34O76011 436 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 TDP2O95551 362 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PROS1P07225 676 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 C8AP07357 584 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 CSF1P09603 554 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF806P0C7X5 589 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 MYZAPP0CAP1 466 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 TCN1P20061 433 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 CPT2P23786 658 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 MAP4P27816 1152 aaKnown RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 LRPAP1P30533 357 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 GSTT1P30711 240 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PCGF2P35227 344 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PTGER3P43115 390 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 LMAN1P49257 510 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 EFNA5P52803 228 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 GPC5P78333 572 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 TNFRSF17Q02223 184 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 DHX9Q08211 1270 aaKnown RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 CYP4F3Q08477 520 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 NPRL3Q12980 569 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 GPS1Q13098 491 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 MADCAM1Q13477 382 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF268Q14587 947 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 MED22Q15528 200 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 ZRANB3Q5FWF4 1079 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 NHSL2Q5HYW2 709 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 FAM69AQ5T7M9 428 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 BROXQ5VW32 411 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PEAR1Q5VY43 1037 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 DESI1Q6ICB0 168 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 BLOC1S2Q6QNY1 142 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PET117Q6UWS5 81 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PRR23CQ6ZRP0 262 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 STXBP4Q6ZWJ1 553 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 LYSMD3Q7Z3D4 306 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 ADCK1Q86TW2 530 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 RALGPS2Q86X27 583 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 METTL23Q86XA0 190 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 TMC8Q8IU68 726 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 MFSD6LQ8IWD5 586 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 KIAA2013Q8IYS2 634 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 TXLNBQ8N3L3 684 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 RASGEF1CQ8N431 466 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 POU5F2Q8N7G0 328 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 RNF152Q8N8N0 203 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 XXYLT1Q8NBI6 393 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF461Q8TAF7 563 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 C2orf15Q8WU43 125 aaKnown RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 SNF8Q96H20 258 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 CEP170P1Q96L14 293 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 GAD1Q99259 594 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 HEPHQ9BQS7 1158 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 AIFM2Q9BRQ8 373 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 LXNQ9BS40 222 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 CINPQ9BW66 212 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 NDEL1Q9GZM8 345 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 SLC5A7Q9GZV3 580 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 OSGEPL1Q9H4B0 414 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PRDM13Q9H4Q3 707 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 ZMAT3Q9HA38 289 aaKnown RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 UCK1Q9HA47 277 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 NEK6Q9HC98 313 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 MAGEE1Q9HCI5 957 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF334Q9HCZ1 680 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 SERINC1Q9NRX5 453 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 SLC38A7Q9NVC3 462 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 SPATA6Q9NWH7 488 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 P4HTMQ9NXG6 502 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PAQR5Q9NXK6 330 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 SAMD15Q9P1V8 674 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 CNOT11Q9UKZ1 510 aaKnown RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 INTS6Q9UL03 887 aaKnown RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 KCNK7Q9Y2U2 307 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PCDHA9Q9Y5H5 950 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 CYP46A1Q9Y6A2 500 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 USP3Q9Y6I4 520 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 RALGAPA1Q6GYQ0 2036 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 TCHHQ07283 1943 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 XIRP2A4UGR9 3374 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 TCRBV16S1A1N1A0A5B0 115 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 HTR3EA5X5Y0 456 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PDE2AO00408 941 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PSMA7O14818 248 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 GIPC1O14908 333 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 CACNG3O60359 315 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PFKFB2O60825 505 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 GUCY1B2O75343 617 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 ULK1O75385 1050 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 RFPL2O75678 378 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 RNF8O76064 485 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 OAZ2O95190 189 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 PCDH8O95206 1070 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 LIPFP07098 398 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 THP07101 528 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 DCNP07585 359 aaKnown RBP2.71□□□□□ -1.98
PRPF39-206ENST00000554429 MCF2P10911 925 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms