RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 SMIM14Q96QK8 99 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 PANX2Q96RD6 677 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 TAAR9Q96RI9 348 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 TRIB3Q96RU7 358 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 NUDT22Q9BRQ3 303 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 ZSCAN5AQ9BUG6 496 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 DDA1Q9BW61 102 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.55□□□□□ -1.36
SLIRP-203ENST00000554074 ASPSCR1Q9BZE9 553 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 SLC25A51Q9H1U9 297 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 CARD9Q9H257 536 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 EPB41L1Q9H4G0 881 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 STN1Q9H668 368 aaKnown RBP6.55□□□□□ -1.36
SLIRP-203ENST00000554074 SUDS3Q9H7L9 328 aaPredicted RBP6.55□□□□□ -1.36
SLIRP-203ENST00000554074 ZFYVE1Q9HBF4 777 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 MAGEE1Q9HCI5 957 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 ABHD10Q9NUJ1 306 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 DDX56Q9NY93 547 aaKnown RBP6.55□□□□□ -1.36
SLIRP-203ENST00000554074 KCNK4Q9NYG8 393 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 TMEM98Q9Y2Y6 226 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 PLEKHM1Q9Y4G2 1056 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 TTLL3Q9Y4R7 772 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 PCDHB11Q9Y5F2 797 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 ADGRG1Q9Y653 693 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 SEC16AO15027 2179 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 TENM4Q6N022 2769 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 LILRA5A6NI73 299 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 B8ZZF3 427 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 INPP4BO15327 924 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 GRID2O43424 1007 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 NUAK1O60285 661 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 MFAP3LO75121 409 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 ASMTLO95671 621 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 FGF3P11487 239 aaPredicted RBP6.54□□□□□ -1.36
SLIRP-203ENST00000554074 SFTPCP11686 197 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 CCL4P13236 92 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 F3P13726 295 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 CSTF2P33240 577 aaKnown RBP eCLIP6.54□□□□□ -1.36
SLIRP-203ENST00000554074 ATP1A2P50993 1020 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 MAPK10P53779 464 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 HADHBP55084 474 aaKnown RBP6.54□□□□□ -1.36
SLIRP-203ENST00000554074 HHEXQ03014 270 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 AP1B1Q10567 949 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 TAZQ16635 292 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 BZW1Q7L1Q6 419 aaKnown RBP6.54□□□□□ -1.36
SLIRP-203ENST00000554074 LYSMD3Q7Z3D4 306 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 ARHGAP22Q7Z5H3 698 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 SLC9B2Q86UD5 537 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 NT5DC3Q86UY8 548 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 ZFAND4Q86XD8 727 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 PHYKPLQ8IUZ5 450 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 RHOT1Q8IXI2 618 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 CCDC170Q8IYT3 715 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.54□□□□□ -1.36
SLIRP-203ENST00000554074 TRAM1L1Q8N609 369 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 BMPERQ8N8U9 685 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 ZSCAN1Q8NBB4 408 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 DTX3LQ8TDB6 740 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 EID2BQ96D98 161 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 AHCYL2Q96HN2 611 aaKnown RBP6.54□□□□□ -1.36
SLIRP-203ENST00000554074 CALR3Q96L12 384 aaKnown RBP6.54□□□□□ -1.36
SLIRP-203ENST00000554074 TEFMQ96QE5 360 aaKnown RBP6.54□□□□□ -1.36
SLIRP-203ENST00000554074 SLC38A3Q99624 504 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 MAK16Q9BXY0 300 aaKnown RBP6.54□□□□□ -1.36
SLIRP-203ENST00000554074 SEMA4CQ9C0C4 833 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 NHEJ1Q9H9Q4 299 aaPredicted RBP6.54□□□□□ -1.36
SLIRP-203ENST00000554074 UCK1Q9HA47 277 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 GRPEL1Q9HAV7 217 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 TRIM39Q9HCM9 518 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 LUC7LQ9NQ29 371 aaKnown RBP6.54□□□□□ -1.36
SLIRP-203ENST00000554074 FOXJ2Q9P0K8 574 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 TBC1D29Q9UFV1 150 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 ZNHIT2Q9UHR6 403 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 PCDHGA4Q9Y5G9 962 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 HEY1Q9Y5J3 304 aa6.54□□□□□ -1.36
SLIRP-203ENST00000554074 OAS3Q9Y6K5 1087 aaKnown RBP6.54□□□□□ -1.36
SLIRP-203ENST00000554074 SPTBP11277 2137 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 MN1Q10571 1320 aaPredicted RBP6.53□□□□□ -1.36
SLIRP-203ENST00000554074 A0A0A6YYK5 440 aaPredicted RBP6.53□□□□□ -1.36
SLIRP-203ENST00000554074 PRR19A6NJB7 356 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 J3QKU1 62 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 CHUKO15111 745 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 TOX3O15405 576 aaPredicted RBP6.53□□□□□ -1.36
SLIRP-203ENST00000554074 CAPN5O15484 640 aaPredicted RBP6.53□□□□□ -1.36
SLIRP-203ENST00000554074 MTSS1O43312 755 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 PSTPIP1O43586 416 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 NRDCO43847 1150 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 VEGFDO43915 354 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 KCNJ13O60928 360 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 SLC25A14O95258 325 aaPredicted RBP6.53□□□□□ -1.36
SLIRP-203ENST00000554074 NDST3O95803 873 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 EML2O95834 649 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 EPOP01588 193 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 KRT1P04264 644 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 ATP1A1P05023 1023 aaKnown RBP6.53□□□□□ -1.36
SLIRP-203ENST00000554074 ANKRD34CP0C6C1 535 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 ACP5P13686 325 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 XRCC1P18887 633 aaPredicted RBP6.53□□□□□ -1.36
SLIRP-203ENST00000554074 FECHP22830 423 aa6.53□□□□□ -1.36
SLIRP-203ENST00000554074 HMGCLP35914 325 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms