RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 XPNPEP2O43895 674 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 ZNF780AO75290 641 aaPredicted RBP8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 GRAP2O75791 330 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 SGPL1O95470 568 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 ANXA6P08133 673 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 ALDH9A1P49189 494 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 PSMD4P55036 377 aaKnown RBP8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 ATP2C1P98194 919 aaPredicted RBP8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 OR6B2Q6IFH4 312 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 DEF8Q6ZN54 512 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 DCUN1D3Q8IWE4 304 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 CDH26Q8IXH8 852 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 EMC1Q8N766 993 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 LHFPL5Q8TAF8 219 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 TXNDC15Q96J42 360 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 NODALQ96S42 347 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 ALG2Q9H553 416 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 PNPLA8Q9NP80 782 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 INTS10Q9NVR2 710 aaKnown RBP8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 ZNF230Q9UIE0 474 aaPredicted RBP8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 SLC39A10Q9ULF5 831 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 RNF24Q9Y225 148 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 SIGLEC16A6NMB1 481 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 ADAMTS4O75173 837 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 HIBADHP31937 336 aaKnown RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 DIO1P49895 249 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 IFITM2Q01629 132 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 GLRA4Q5JXX5 417 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 CERCAMQ5T4B2 595 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 RC3H1Q5TC82 1133 aaKnown RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 BRAT1Q6PJG6 821 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 LRRN1Q6UXK5 716 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 NT5DC3Q86UY8 548 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 C11orf65Q8NCR3 313 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 SMG8Q8ND04 991 aaKnown RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 TRPV1Q8NER1 839 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 ASB15Q8WXK1 588 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 GMPR2Q9P2T1 348 aaKnown RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 DIMT1Q9UNQ2 313 aaKnown RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 CYTIPO60759 359 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 RNGTTO60942 597 aaKnown RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 CCNB2O95067 398 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 XPAP23025 273 aaPredicted RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 PTAFRP25105 342 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 CTAG1AP78358 180 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 MC2RQ01718 297 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 GPAT3Q53EU6 434 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 RBM48Q5RL73 367 aaKnown RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 AADACL4Q5VUY2 407 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 B3GNT9Q6UX72 402 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 LSMEM2Q8N112 164 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 GHDCQ8N2G8 530 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 SHC3Q92529 594 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 APOPT1Q96IL0 206 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 MCEEQ96PE7 176 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 NTMT1Q9BV86 223 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 ZNF518BQ9C0D4 1074 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 CDY1Q9Y6F8 540 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 NCF1BA6NI72 391 aaPredicted RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 NCF1CA8MVU1 366 aaPredicted RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 NDST3O95803 873 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 CYP2A7P20853 494 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 GYG1P46976 350 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 IL18Q14116 193 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 GRM2Q14416 872 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 SPPL2CQ8IUH8 684 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 RHOT1Q8IXI2 618 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 SETD6Q8TBK2 473 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 HS6ST2Q96MM7 605 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 MBOAT7Q96N66 472 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 APBA2Q99767 749 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 FAM117AQ9C073 453 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 KCTD10Q9H3F6 313 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 WDR55Q9H6Y2 383 aaPredicted RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 C14orf93Q9H972 538 aaKnown RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 XPR1Q9UBH6 696 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 CLUHO75153 1309 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 GATCO43716 136 aaKnown RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 CDKN2CP42773 168 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 RPL26P61254 145 aaKnown RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 PON3Q15166 354 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 XKR9Q5GH70 373 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 MOB2Q70IA6 237 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 OR2L5Q8NG80 312 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 OR10H5Q8NGA6 315 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 GMLQ99445 158 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 FUNDC2Q9BWH2 189 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 PAPOLGQ9BWT3 736 aaKnown RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 B3GNT3Q9Y2A9 372 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 TNPO3Q9Y5L0 923 aaKnown RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 UBXN8O00124 270 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 ZNF682O95780 498 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 CEBPGP53567 150 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 NCS1P62166 190 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 BST2Q10589 180 aaKnown RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 LCN1P1Q5VSP4 162 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 TMEM81Q6P7N7 255 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 XKRXQ6PP77 449 aa8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 UBE2R2Q712K3 238 aaPredicted RBP8.95□□□□□ -0.98
GTF2A1-203ENST00000553612 LURAP1LQ8IV03 231 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms