RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 RNF224P0DH78 156 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 PRKAR1AP10644 381 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 CCNB1P14635 433 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 CYP11B1P15538 503 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 XPAP23025 273 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-219ENST00000553488 TSPAN7P41732 249 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 STAT1P42224 750 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 RGRP47804 291 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 UQCRFS1P47985 274 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 GP2P55259 537 aaKnown RBP7.27□□□□□ -1.25
ATXN3-219ENST00000553488 HDAC4P56524 1084 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 NOMO3P69849 1222 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 CDK5R2Q13319 367 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 SQSTM1Q13501 440 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 CYTH1Q15438 398 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 CDO1Q16878 200 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 CCDC14Q49A88 953 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 LACTB2Q53H82 288 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-219ENST00000553488 ATP1A1-AS1Q5TC04 95 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 ZBTB37Q5TC79 503 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 MEI1Q5TIA1 1274 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 ANKS6Q68DC2 871 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 ERAP2Q6P179 960 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 BRAT1Q6PJG6 821 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 LIPIQ6XZB0 460 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 DPPA4Q7L190 304 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 FAM214BQ7L5A3 538 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 DNAAF5Q86Y56 855 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 NAGSQ8N159 534 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 RTL3Q8N8U3 475 aaKnown RBP7.27□□□□□ -1.25
ATXN3-219ENST00000553488 AGBL5Q8NDL9 886 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 OR4D9Q8NGE8 314 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 NTAN1Q96AB6 310 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 ECHDC3Q96DC8 303 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 RTP4Q96DX8 246 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 WDR26Q9H7D7 661 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 OCIAD1Q9NX40 245 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 AKAP7Q9P0M2 348 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-219ENST00000553488 TAAR2Q9P1P5 351 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 PDP2Q9P2J9 529 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 PLEKHB1Q9UF11 243 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-219ENST00000553488 ZC3H7BQ9UGR2 993 aaKnown RBP7.27□□□□□ -1.25
ATXN3-219ENST00000553488 DNAJC12Q9UKB3 198 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 TP53TG5Q9Y2B4 290 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 ATP6V1DQ9Y5K8 247 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 OAS3Q9Y6K5 1087 aaKnown RBP7.27□□□□□ -1.25
ATXN3-219ENST00000553488 POLQO75417 2590 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 ZFHX3Q15911 3703 aa7.27□□□□□ -1.25
ATXN3-219ENST00000553488 C2CD4BA6NLJ0 364 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 RHPN2P1A8MT19 583 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 WASH4PA8MWX3 477 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 RASA4BC9J798 803 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 K7EM74 188 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 BIN1O00499 593 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 FANCGO15287 622 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 PPM1DO15297 605 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 RASA4O43374 803 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 CEACAM5P06731 702 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 PLEKP08567 350 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-219ENST00000553488 ELFN1P0C7U0 828 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 MYCLP1P12525 358 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-219ENST00000553488 NR1D1P20393 614 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 KELP23276 732 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 AK4P27144 223 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-219ENST00000553488 ALDH4A1P30038 563 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 PTPN9P43378 593 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 GPR3P46089 330 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 ST13P50502 369 aaKnown RBP7.26□□□□□ -1.25
ATXN3-219ENST00000553488 KLRB1Q12918 225 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 GRM3Q14832 879 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 TAF3Q5VWG9 929 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 NKAIN2Q5VXU1 208 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 AFMIDQ63HM1 303 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 STRADAQ7RTN6 431 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 TIPARPQ7Z3E1 657 aaKnown RBP7.26□□□□□ -1.25
ATXN3-219ENST00000553488 UBE3DQ7Z6J8 389 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 NOP9Q86U38 636 aaKnown RBP7.26□□□□□ -1.25
ATXN3-219ENST00000553488 CAMK1DQ8IU85 385 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 WFDC3Q8IUB2 231 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 NLGN4XQ8N0W4 816 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 PYROXD2Q8N2H3 581 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 CCDC112Q8NEF3 446 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 NLGN4YQ8NFZ3 816 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-219ENST00000553488 JOSD2Q8TAC2 188 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 GPT2Q8TD30 523 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 RXFP2Q8WXD0 754 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 STARD8Q92502 1023 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 CENPIQ92674 756 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-219ENST00000553488 NSMCE3Q96MG7 304 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 ZNF641Q96N77 438 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-219ENST00000553488 TUBGCP5Q96RT8 1024 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 NCAPGQ9BPX3 1015 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 GSDMCQ9BYG8 508 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 FRMD8Q9BZ67 464 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-219ENST00000553488 ASPSCR1Q9BZE9 553 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 GPN2Q9H9Y4 310 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-219ENST00000553488 CARS2Q9HA77 564 aaKnown RBP7.26□□□□□ -1.25
ATXN3-219ENST00000553488 SLC39A1Q9NY26 324 aa7.26□□□□□ -1.25
ATXN3-219ENST00000553488 TMEM184BQ9Y519 407 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-219ENST00000553488 FHOD1Q9Y613 1164 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms