RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 SCNM1Q9BWG6 230 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 ATXN10Q9UBB4 475 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.26■□□□□ 0.51
CPSF2-202ENST00000553427 GOLGA6L10A0A0M3HER8 536 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 CHUKO15111 745 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 BUD23O43709 281 aaKnown RBP18.26■□□□□ 0.51
CPSF2-202ENST00000553427 TOP3BO95985 862 aaKnown RBP18.26■□□□□ 0.51
CPSF2-202ENST00000553427 FNTAP49354 379 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 CTBSQ01459 385 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 LDLRAP1Q5SW96 308 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 TTC27Q6P3X3 843 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 GUSBP11Q6P575 273 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 DHRS13Q6UX07 377 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 FAM151BQ6UXP7 276 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 MARK2Q7KZI7 788 aaKnown RBP18.26■□□□□ 0.51
CPSF2-202ENST00000553427 PRUNE1Q86TP1 453 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 TMPRSS12Q86WS5 348 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 C17orf82Q86X59 251 aaPredicted RBP18.26■□□□□ 0.51
CPSF2-202ENST00000553427 TAB3Q8N5C8 712 aaPredicted RBP18.26■□□□□ 0.51
CPSF2-202ENST00000553427 FAM46DQ8NEK8 389 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 DDHD1Q8NEL9 900 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 IFI44Q8TCB0 444 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 MAGOHBQ96A72 148 aaKnown RBP18.26■□□□□ 0.51
CPSF2-202ENST00000553427 ZCCHC2Q9C0B9 1178 aaKnown RBP18.26■□□□□ 0.51
CPSF2-202ENST00000553427 OR2AG1Q9H205 316 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 CASS4Q9NQ75 786 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 TAAR2Q9P1P5 351 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 PADI4Q9UM07 663 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 MSRB2Q9Y3D2 182 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 GPSM3Q9Y4H4 160 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 ST14Q9Y5Y6 855 aa18.26■□□□□ 0.51
CPSF2-202ENST00000553427 MROH6A6NGR9 719 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 AGAP14A8MT82 685 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 H7C0S8 307 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 NOBOXO60393 691 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 PHF2O75151 1096 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 PRAMEF1O95521 474 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 GAS8O95995 478 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 APRTP07741 180 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 ZNF8P17098 575 aaPredicted RBP18.25■□□□□ 0.51
CPSF2-202ENST00000553427 LMAN1P49257 510 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 CLCNKAP51800 687 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 XIAPP98170 497 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 CDK16Q00536 496 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 LAMB3Q13751 1172 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 TCEA2Q15560 299 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 EFL1Q7Z2Z2 1120 aaKnown RBP18.25■□□□□ 0.51
CPSF2-202ENST00000553427 OR52K1Q8NGK4 314 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 RANBP9Q96S59 729 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 NAPGQ99747 312 aaPredicted RBP18.25■□□□□ 0.51
CPSF2-202ENST00000553427 AP1M1Q9BXS5 423 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 FKBPLQ9UIM3 349 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 KLK13Q9UKR3 277 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 RIMKLBQ9ULI2 386 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 KCTD3Q9Y597 815 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 PCYT1BQ9Y5K3 369 aaPredicted RBP18.25■□□□□ 0.51
CPSF2-202ENST00000553427 ACACBO00763 2458 aa18.25■□□□□ 0.51
CPSF2-202ENST00000553427 GRID2O43424 1007 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 SRP72O76094 671 aaKnown RBP18.24■□□□□ 0.51
CPSF2-202ENST00000553427 MYF5P13349 255 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 TPSB2P20231 275 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 AK4P27144 223 aaPredicted RBP18.24■□□□□ 0.51
CPSF2-202ENST00000553427 COILP38432 576 aaPredicted RBP18.24■□□□□ 0.51
CPSF2-202ENST00000553427 ACTR1BP42025 376 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 MAGEA6P43360 314 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 ACTR1AP61163 376 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 NFATC2Q13469 925 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 HLTFQ14527 1009 aaKnown RBP eCLIP18.24■□□□□ 0.51
CPSF2-202ENST00000553427 PTPRCAPQ14761 206 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 POU6F1Q14863 301 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 TPSAB1Q15661 275 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 KHDC1Q4VXA5 237 aaKnown RBP18.24■□□□□ 0.51
CPSF2-202ENST00000553427 C14orf28Q4W4Y0 310 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 CCDC157Q569K6 752 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 CERCAMQ5T4B2 595 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 PPP1R21Q6ZMI0 780 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 DNAAF3Q8N9W5 541 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 OR13C4Q8NGS5 318 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 ZNF398Q8TD17 642 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 STYXQ8WUJ0 223 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 DPEP2Q9H4A9 486 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 SUDS3Q9H7L9 328 aaPredicted RBP18.24■□□□□ 0.51
CPSF2-202ENST00000553427 SPATS2LQ9NUQ6 558 aaKnown RBP18.24■□□□□ 0.51
CPSF2-202ENST00000553427 NLE1Q9NVX2 485 aaPredicted RBP18.24■□□□□ 0.51
CPSF2-202ENST00000553427 SMARCAL1Q9NZC9 954 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 SIRPGQ9P1W8 387 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 ZNHIT2Q9UHR6 403 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 NEU2Q9Y3R4 380 aa18.24■□□□□ 0.51
CPSF2-202ENST00000553427 CTAGE9A4FU28 777 aa18.23■□□□□ 0.51
CPSF2-202ENST00000553427 B4DGG1 531 aa18.23■□□□□ 0.51
CPSF2-202ENST00000553427 AP3B1O00203 1094 aa18.23■□□□□ 0.51
CPSF2-202ENST00000553427 ZNF185O15231 689 aa18.23■□□□□ 0.51
CPSF2-202ENST00000553427 OPA1O60313 960 aa18.23■□□□□ 0.51
CPSF2-202ENST00000553427 PNLIPP16233 465 aa18.23■□□□□ 0.51
CPSF2-202ENST00000553427 TPH1P17752 444 aa18.23■□□□□ 0.51
CPSF2-202ENST00000553427 INSM1Q01101 510 aaPredicted RBP18.23■□□□□ 0.51
CPSF2-202ENST00000553427 GPR33Q49SQ1 333 aa18.23■□□□□ 0.51
CPSF2-202ENST00000553427 GPRC6AQ5T6X5 926 aa18.23■□□□□ 0.51
CPSF2-202ENST00000553427 CCDC137Q6PK04 289 aaKnown RBP18.23■□□□□ 0.51
CPSF2-202ENST00000553427 SLC30A9Q6PML9 568 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms