RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 UCK1Q9HA47 277 aa14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 VPS4AQ9UN37 437 aa14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 OAS3Q9Y6K5 1087 aaKnown RBP14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 GRID2O43424 1007 aa14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 KATNA1O75449 491 aa14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 AGFG2O95081 481 aa14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 FTLP02792 175 aaPredicted RBP14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 CCNYL3P0C7X3 344 aa14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 GZMAP12544 262 aa14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 NR1D1P20393 614 aa14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 F8A1P23610 371 aa14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 RPL26P61254 145 aaKnown RBP14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 MYL5Q02045 173 aa14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 CYB5D1Q6P9G0 228 aa14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 RASGRP3Q8IV61 690 aa14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 TRIM48Q8IWZ4 208 aa14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 GALNT6Q8NCL4 622 aa14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 SMIM14Q96QK8 99 aa14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 TDRD1Q9BXT4 1180 aaKnown RBP14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 TWSG1Q9GZX9 223 aa14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 CARD9Q9H257 536 aa14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 FAM83DQ9H4H8 585 aa14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 PKD2L2Q9NZM6 624 aa14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 CNOT6Q9ULM6 557 aaKnown RBP14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 RPL26L1Q9UNX3 145 aaKnown RBP14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 PCYT1BQ9Y5K3 369 aaPredicted RBP14.02□□□□□ -0.17
CHMP1A-210ENST00000551981 C1orf232A0A0U1RR37 186 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 CDC14CA4D256 554 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 RGSL1A5PLK6 1076 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 LRRC10BA6NIK2 292 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 NUAK1O60285 661 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 RASSF9O75901 435 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 MTA2O94776 668 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 UBXN7O94888 489 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 NDUFA10O95299 355 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 CLDN7O95471 211 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 VIPP01282 170 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 C9P02748 559 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 MYBL1P10243 752 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 ZNF28P17035 718 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 IL1R2P27930 398 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 ZNF165P49910 485 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 PMS2P54278 862 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 GFERP55789 205 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 UBE2IP63279 158 aaKnown RBP14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 ASIC2Q16515 512 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 HENMT1Q5T8I9 393 aaKnown RBP14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 FHL5Q5TD97 284 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 LPCAT1Q8NF37 534 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 CCHCR1Q8TD31 782 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 TEKT4Q8WW24 435 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 TGM7Q96PF1 710 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 OR6C1Q96RD1 312 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 OSGEPL1Q9H4B0 414 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 AMACRQ9UHK6 382 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 LNPEPQ9UIQ6 1025 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 TLK1Q9UKI8 766 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 CHKBQ9Y259 395 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 TTLL3Q9Y4R7 772 aa14.01□□□□□ -0.17
CHMP1A-210ENST00000551981 PIPSLA2A3N6 862 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 TTLL8A6PVC2 850 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 K7EM74 188 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 CREG1O75629 220 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 KIAA0754O94854 1291 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 RECKO95980 971 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 MT-ND3P03897 115 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 RARAP10276 462 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 TYRP1P17643 537 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 AMD1P17707 334 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 XRCC1P18887 633 aaPredicted RBP14□□□□□ -0.17
CHMP1A-210ENST00000551981 CASP14P31944 242 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 GARSP41250 739 aaKnown RBP14□□□□□ -0.17
CHMP1A-210ENST00000551981 SPINT3P49223 89 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 SEPHS1P49903 392 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 CLCNKAP51800 687 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 DSC2Q02487 901 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 KRT81Q14533 505 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 ANKRD20A8PQ5CZ79 823 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 ALG1LQ6GMV1 187 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 TIGD7Q6NT04 549 aaPredicted RBP14□□□□□ -0.17
CHMP1A-210ENST00000551981 TMEM26Q6ZUK4 368 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 AOPEPQ8N6M6 819 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 GALNT11Q8NCW6 608 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 SEC14L1Q92503 715 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 ELMO2Q96JJ3 720 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 PLEKHG4BQ96PX9 1271 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 LYSMD1Q96S90 227 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 ZNF768Q9H5H4 540 aaKnown RBP14□□□□□ -0.17
CHMP1A-210ENST00000551981 HAUS4Q9H6D7 363 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 PCDH9Q9HC56 1237 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 PCDH18Q9HCL0 1135 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 KLC4Q9NSK0 619 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 CHMP5Q9NZZ3 219 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 RCOR3Q9P2K3 495 aaPredicted RBP14□□□□□ -0.17
CHMP1A-210ENST00000551981 MYO1AQ9UBC5 1043 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 PLEKHB1Q9UF11 243 aaPredicted RBP14□□□□□ -0.17
CHMP1A-210ENST00000551981 PADI1Q9ULC6 663 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 PCDHGA6Q9Y5G7 932 aa14□□□□□ -0.17
CHMP1A-210ENST00000551981 GOLGA6L3A6NEY3 463 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms