RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 CHRNA6Q15825 494 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 MARK2Q7KZI7 788 aaKnown RBP10.53□□□□□ -0.72
PTCH1-225ENST00000551845 TAF8Q7Z7C8 310 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 GLRX5Q86SX6 157 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 OR4C6Q8NH72 309 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 GDAP1Q8TB36 358 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 STYXQ8WUJ0 223 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 HNRNPLLQ8WVV9 542 aaKnown RBP10.53□□□□□ -0.72
PTCH1-225ENST00000551845 GLMNQ92990 594 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 GLYATL1Q969I3 302 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 SCARF2Q96GP6 870 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-225ENST00000551845 VPS35Q96QK1 796 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 LRRC61Q9BV99 259 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 FRMD8Q9BZ67 464 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-225ENST00000551845 CLPBQ9H078 707 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 ASB8Q9H765 288 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 FGF22Q9HCT0 170 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 CASS4Q9NQ75 786 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 EIF2B3Q9NR50 452 aaKnown RBP10.53□□□□□ -0.72
PTCH1-225ENST00000551845 EVA1BQ9NVM1 165 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 PIH1D1Q9NWS0 290 aaKnown RBP10.53□□□□□ -0.72
PTCH1-225ENST00000551845 BFARQ9NZS9 450 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 VPS18Q9P253 973 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 ZNHIT2Q9UHR6 403 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 SUFUQ9UMX1 484 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 APOBEC2Q9Y235 224 aaKnown RBP10.53□□□□□ -0.72
PTCH1-225ENST00000551845 KCTD3Q9Y597 815 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 CEP192Q8TEP8 1941 aa10.52□□□□□ -0.72
PTCH1-225ENST00000551845 SHROOM3Q8TF72 1996 aa10.52□□□□□ -0.72
PTCH1-225ENST00000551845 AKAP13Q12802 2813 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 HEATR9A2RTY3 570 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 GPR89AB7ZAQ6 455 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 VEGFDO43915 354 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 NUAK1O60285 661 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 UGT1A9O60656 530 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 SRP72O76094 671 aaKnown RBP10.52□□□□□ -0.73
PTCH1-225ENST00000551845 CDK14O94921 469 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 GPR89BP0CG08 455 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 GIMD1P0DJR0 217 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 CDK4P11802 303 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 UGT1A6P19224 532 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 TPSB2P20231 275 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 UGT1A1P22309 533 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 UGT1A4P22310 534 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 UGT1A3P35503 534 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 UGT1A5P35504 534 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 ADCY8P40145 1251 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 RPIAP49247 311 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 DAB2P98082 770 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 TMEM115Q12893 351 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-225ENST00000551845 ILF3Q12906 894 aaKnown RBP eCLIP10.52□□□□□ -0.73
PTCH1-225ENST00000551845 SEPT6Q14141 434 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 POU6F1Q14863 301 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 TPSAB1Q15661 275 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 DEFB133Q30KQ1 61 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 ATP13A5Q4VNC0 1218 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 PYCR3Q53H96 274 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 PCID2Q5JVF3 399 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 CERCAMQ5T4B2 595 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 LRRC8BQ6P9F7 803 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 FAM151BQ6UXP7 276 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 NLRP9Q7RTR0 991 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 TRIM74Q86UV6 250 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 GALNT13Q8IUC8 556 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 PHYKPLQ8IUZ5 450 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 KLHL7Q8IXQ5 586 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 FAM181AQ8N9Y4 354 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 FAM46DQ8NEK8 389 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 OR13C4Q8NGS5 318 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 BAHD1Q8TBE0 780 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-225ENST00000551845 PDXPQ96GD0 296 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 MS4A3Q96HJ5 214 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 CDKN2AIPNLQ96HQ2 116 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 APOLD1Q96LR9 279 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 GSDMCQ9BYG8 508 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 DDX47Q9H0S4 455 aaKnown RBP10.52□□□□□ -0.73
PTCH1-225ENST00000551845 TMEM168Q9H0V1 697 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 CCDC86Q9H6F5 360 aaKnown RBP10.52□□□□□ -0.73
PTCH1-225ENST00000551845 SUDS3Q9H7L9 328 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-225ENST00000551845 CAAP1Q9H8G2 361 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 UGT1A7Q9HAW7 530 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 UGT1A10Q9HAW8 530 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 UGT1A8Q9HAW9 530 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 NCKIPSDQ9NZQ3 722 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 PCYOX1Q9UHG3 505 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 NEU2Q9Y3R4 380 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 SLC30A1Q9Y6M5 507 aa10.52□□□□□ -0.73
PTCH1-225ENST00000551845 TNRC6BQ9UPQ9 1833 aaKnown RBP10.51□□□□□ -0.73
PTCH1-225ENST00000551845 PI4KAP42356 2102 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 FAM221BA6H8Z2 402 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 MROH6A6NGR9 719 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 GRID2O43424 1007 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 DNAJC6O75061 913 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 TERF1P54274 439 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 SESN2P58004 480 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-225ENST00000551845 CTBSQ01459 385 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 GTF2H3Q13889 308 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 LRP8Q14114 963 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 GPR33Q49SQ1 333 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 LDLRAP1Q5SW96 308 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms