RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 PPARGP37231 505 aaPredicted RBP11.42□□□□□ -0.58
RAB5C-208ENST00000551338 SPAM1P38567 509 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 CLCN7P51798 805 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 MNAT1P51948 309 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 HK3P52790 923 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 C1QTNF8P60827 252 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 SLC25A3Q00325 362 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 CUL3Q13618 768 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 KPNB1Q14974 876 aaKnown RBP11.42□□□□□ -0.58
RAB5C-208ENST00000551338 HERC3Q15034 1050 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 CARD16Q5EG05 197 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 ACSBG2Q5FVE4 666 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 NXNQ6DKJ4 435 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 CERS6Q6ZMG9 384 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 CYHR1Q6ZMK1 362 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 RAB44Q7Z6P3 723 aaPredicted RBP11.42□□□□□ -0.58
RAB5C-208ENST00000551338 ADGRD2Q7Z7M1 963 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 SCUBE1Q8IWY4 988 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 ULK2Q8IYT8 1036 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 PELI3Q8N2H9 469 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 CBARPQ8N350 705 aaPredicted RBP11.42□□□□□ -0.58
RAB5C-208ENST00000551338 FBXO39Q8N4B4 442 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 AFAP1L2Q8N4X5 818 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 PAF1Q8N7H5 531 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 ENDOVQ8N8Q3 282 aaKnown RBP11.42□□□□□ -0.58
RAB5C-208ENST00000551338 CHST14Q8NCH0 376 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 STAG3L4Q8TBR4 150 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 ACTRT2Q8TDY3 377 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 LINGO1Q96FE5 620 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 CLPTM1LQ96KA5 538 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 MARK4Q96L34 752 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 NSUN5Q96P11 429 aaKnown RBP11.42□□□□□ -0.58
RAB5C-208ENST00000551338 MCCC1Q96RQ3 725 aaPredicted RBP11.42□□□□□ -0.58
RAB5C-208ENST00000551338 CPEB1Q9BZB8 566 aaKnown RBP11.42□□□□□ -0.58
RAB5C-208ENST00000551338 SUV39H2Q9H5I1 410 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 ZDHHC6Q9H6R6 413 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 ASB8Q9H765 288 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 ZDHHC7Q9NXF8 308 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 HECAQ9UBI9 543 aaPredicted RBP11.42□□□□□ -0.58
RAB5C-208ENST00000551338 RNF112Q9ULX5 631 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 COPG1Q9Y678 874 aaKnown RBP11.42□□□□□ -0.58
RAB5C-208ENST00000551338 CEP350Q5VT06 3117 aa11.42□□□□□ -0.58
RAB5C-208ENST00000551338 ZFC3H1O60293 1989 aaKnown RBP11.41□□□□□ -0.58
RAB5C-208ENST00000551338 BRCA2P51587 3418 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 A0A088AWK7 358 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 IQCF5A8MTL0 148 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 GRXCR1A8MXD5 290 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 WASH3PC4AMC7 463 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 STX16-NPEPL1H3BU86 382 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 STX16O14662 325 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 PER2O15055 1255 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 BNIP3LO60238 219 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 ENTPD5O75356 428 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 CDK14O94921 469 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 GFAPP14136 432 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 LHCGRP22888 699 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 EEF1DP29692 281 aaKnown RBP11.41□□□□□ -0.58
RAB5C-208ENST00000551338 ADSLP30566 484 aaPredicted RBP11.41□□□□□ -0.58
RAB5C-208ENST00000551338 CDH13P55290 713 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 SEMG2Q02383 582 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 E2F5Q15329 346 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 CHRNA6Q15825 494 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 PFKFB4Q16877 469 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 TMEM215Q68D42 235 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 CLEC6AQ6EIG7 209 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 GRAMD4Q6IC98 578 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 FAM109BQ6ICB4 259 aaPredicted RBP11.41□□□□□ -0.58
RAB5C-208ENST00000551338 CRTC1Q6UUV9 634 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 DPY19L3Q6ZPD9 716 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 TPRG1Q6ZUI0 275 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 Q6ZVU0 165 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 CHSY3Q70JA7 882 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 SNX32Q86XE0 403 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 KIRREL3Q8IZU9 778 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 RBFAQ8N0V3 343 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 ZNF557Q8N988 423 aaPredicted RBP11.41□□□□□ -0.58
RAB5C-208ENST00000551338 GPR26Q8NDV2 337 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 CEP70Q8NHQ1 597 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 EEF1AKMT1Q8WVE0 214 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 FUBP1Q96AE4 644 aaKnown RBP11.41□□□□□ -0.58
RAB5C-208ENST00000551338 OTUB2Q96DC9 234 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 CMTM5Q96DZ9 223 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 MRGPRX3Q96LB0 322 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 LENG8Q96PV6 779 aaPredicted RBP11.41□□□□□ -0.58
RAB5C-208ENST00000551338 ASB2Q96Q27 587 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 RTKNQ9BST9 563 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 THTPAQ9BU02 230 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 BOCQ9BWV1 1114 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 C1QTNF3Q9BXJ4 246 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 MTIF3Q9H2K0 278 aaKnown RBP11.41□□□□□ -0.58
RAB5C-208ENST00000551338 IL26Q9NPH9 171 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 SLC7A8Q9UHI5 535 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 SLCO3A1Q9UIG8 710 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 ZMYM5Q9UJ78 669 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 APPL1Q9UKG1 709 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 ERVW-1Q9UQF0 538 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 DHRS7Q9Y394 339 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 TRAF6Q9Y4K3 522 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 PRSS21Q9Y6M0 314 aa11.41□□□□□ -0.58
RAB5C-208ENST00000551338 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms