RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 PPP4R1Q8TF05 950 aa13.24□□□□□ -0.29
SNRPF-203ENST00000551316 ZNF606Q8WXB4 792 aa13.24□□□□□ -0.29
SNRPF-203ENST00000551316 SNX21Q969T3 373 aa13.24□□□□□ -0.29
SNRPF-203ENST00000551316 SLC41A2Q96JW4 573 aa13.24□□□□□ -0.29
SNRPF-203ENST00000551316 PLEKHG4BQ96PX9 1271 aa13.24□□□□□ -0.29
SNRPF-203ENST00000551316 AGAP2Q99490 1192 aa13.24□□□□□ -0.29
SNRPF-203ENST00000551316 WASH6PQ9NQA3 447 aa13.24□□□□□ -0.29
SNRPF-203ENST00000551316 TMEM248Q9NWD8 314 aa13.24□□□□□ -0.29
SNRPF-203ENST00000551316 PPARGC1AQ9UBK2 798 aaKnown RBP13.24□□□□□ -0.29
SNRPF-203ENST00000551316 TNFRSF10DQ9UBN6 386 aa13.24□□□□□ -0.29
SNRPF-203ENST00000551316 CD84Q9UIB8 345 aa13.24□□□□□ -0.29
SNRPF-203ENST00000551316 ADAM21Q9UKJ8 722 aa13.24□□□□□ -0.29
SNRPF-203ENST00000551316 SEC16AO15027 2179 aa13.24□□□□□ -0.29
SNRPF-203ENST00000551316 INTS1Q8N201 2190 aaKnown RBP13.23□□□□□ -0.29
SNRPF-203ENST00000551316 TOX3O15405 576 aaPredicted RBP13.23□□□□□ -0.29
SNRPF-203ENST00000551316 SCRG1O75711 98 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 ALPPP05187 535 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 RORAP35398 523 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 FLT3P36888 993 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 STK38Q15208 465 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 CEBPEQ15744 281 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 Q6ZVL8 140 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 CHST15Q7LFX5 561 aaPredicted RBP13.23□□□□□ -0.29
SNRPF-203ENST00000551316 SLC9B2Q86UD5 537 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 DNAAF5Q86Y56 855 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 GALNT13Q8IUC8 556 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 DSELQ8IZU8 1212 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 PGAP3Q96FM1 320 aaPredicted RBP13.23□□□□□ -0.29
SNRPF-203ENST00000551316 PAGE5Q96GU1 130 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 CNDP1Q96KN2 507 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 NT5C1BQ96P26 610 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 SMIM14Q96QK8 99 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 SPOCK3Q9BQ16 436 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 SCAND2PQ9GZW5 306 aaPredicted RBP13.23□□□□□ -0.29
SNRPF-203ENST00000551316 MAGEH1Q9H213 219 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 LIME1Q9H400 295 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 EPB41L1Q9H4G0 881 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 PDE7BQ9NP56 450 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 CNTN6Q9UQ52 1028 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 BTRCQ9Y297 605 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 ANKRD12Q6UB98 2062 aa13.23□□□□□ -0.29
SNRPF-203ENST00000551316 CREB3O43889 395 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 DNAJC6O75061 913 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 RAB40ALP0C0E4 278 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 ACP5P13686 325 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 F3P13726 295 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 ETFBP38117 255 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 MAPKAPK2P49137 400 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 SLC6A3Q01959 620 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 ZNF169Q14929 603 aaPredicted RBP13.22□□□□□ -0.29
SNRPF-203ENST00000551316 MEA1Q16626 185 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 PTCHD3Q3KNS1 767 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 CFAP58Q5T655 872 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 RWDD4Q6NW29 188 aaKnown RBP13.22□□□□□ -0.29
SNRPF-203ENST00000551316 IRGCQ6NXR0 463 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 FAM180AQ6UWF9 173 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 TMEM26Q6ZUK4 368 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 C11orf57Q6ZUT1 292 aaPredicted RBP13.22□□□□□ -0.29
SNRPF-203ENST00000551316 TSPAN33Q86UF1 283 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 ZNF354CQ86Y25 554 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 SMYD4Q8IYR2 804 aaPredicted RBP13.22□□□□□ -0.29
SNRPF-203ENST00000551316 SIDT2Q8NBJ9 832 aaKnown RBP13.22□□□□□ -0.29
SNRPF-203ENST00000551316 LRRN4CLQ8ND94 238 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 ZNF514Q96K75 400 aaPredicted RBP13.22□□□□□ -0.29
SNRPF-203ENST00000551316 ZNF641Q96N77 438 aaPredicted RBP13.22□□□□□ -0.29
SNRPF-203ENST00000551316 NLNQ9BYT8 704 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 PDFQ9HBH1 243 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 METTL14Q9HCE5 456 aaKnown RBP13.22□□□□□ -0.29
SNRPF-203ENST00000551316 FAM13BQ9NYF5 915 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 TMEM63CQ9P1W3 806 aa13.22□□□□□ -0.29
SNRPF-203ENST00000551316 TTC24A2A3L6 582 aaPredicted RBP13.21□□□□□ -0.29
SNRPF-203ENST00000551316 TRAFD1O14545 582 aaPredicted RBP13.21□□□□□ -0.29
SNRPF-203ENST00000551316 STX10O60499 249 aa13.21□□□□□ -0.29
SNRPF-203ENST00000551316 HEXIM1O94992 359 aaKnown RBP13.21□□□□□ -0.29
SNRPF-203ENST00000551316 LCA5LO95447 670 aa13.21□□□□□ -0.29
SNRPF-203ENST00000551316 CLDN14O95500 239 aa13.21□□□□□ -0.29
SNRPF-203ENST00000551316 ATP1A1P05023 1023 aaKnown RBP13.21□□□□□ -0.29
SNRPF-203ENST00000551316 EPB41P11171 864 aaKnown RBP13.21□□□□□ -0.29
SNRPF-203ENST00000551316 KRT5P13647 590 aa13.21□□□□□ -0.29
SNRPF-203ENST00000551316 RHOQP17081 205 aa13.21□□□□□ -0.29
SNRPF-203ENST00000551316 PEX6Q13608 980 aa13.21□□□□□ -0.29
SNRPF-203ENST00000551316 INO80DQ53TQ3 878 aaPredicted RBP13.21□□□□□ -0.29
SNRPF-203ENST00000551316 ZFYVE27Q5T4F4 411 aa13.21□□□□□ -0.29
SNRPF-203ENST00000551316 GFRALQ6UXV0 394 aa13.21□□□□□ -0.29
SNRPF-203ENST00000551316 TMEM126BQ8IUX1 230 aa13.21□□□□□ -0.29
SNRPF-203ENST00000551316 CHDHQ8NE62 594 aaPredicted RBP13.21□□□□□ -0.29
SNRPF-203ENST00000551316 ZNF397Q8NF99 534 aaPredicted RBP13.21□□□□□ -0.29
SNRPF-203ENST00000551316 SH3KBP1Q96B97 665 aa13.21□□□□□ -0.29
SNRPF-203ENST00000551316 STN1Q9H668 368 aaKnown RBP13.21□□□□□ -0.29
SNRPF-203ENST00000551316 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.21□□□□□ -0.29
SNRPF-203ENST00000551316 ZNF624Q9P2J8 865 aaPredicted RBP13.21□□□□□ -0.29
SNRPF-203ENST00000551316 TINAGQ9UJW2 476 aa13.21□□□□□ -0.29
SNRPF-203ENST00000551316 HPCAL4Q9UM19 191 aa13.21□□□□□ -0.29
SNRPF-203ENST00000551316 MEN1O00255 615 aa13.2□□□□□ -0.3
SNRPF-203ENST00000551316 KLF7O75840 302 aaPredicted RBP13.2□□□□□ -0.3
SNRPF-203ENST00000551316 LRIG2O94898 1065 aa13.2□□□□□ -0.3
SNRPF-203ENST00000551316 UNC5CO95185 931 aa13.2□□□□□ -0.3
SNRPF-203ENST00000551316 MST1P26927 711 aa13.2□□□□□ -0.3
SNRPF-203ENST00000551316 GNA15P30679 374 aa13.2□□□□□ -0.3
SNRPF-203ENST00000551316 SLC19A1P41440 591 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms