RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 OR6A2O95222 327 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 THRAP10827 490 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 NTHL1P78549 312 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 SOX4Q06945 474 aaPredicted RBP12.13□□□□□ -0.47
NR4A1-215ENST00000550557 FBXO43Q4G163 708 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 C6orf89Q6UWU4 347 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 SLC39A11Q8N1S5 342 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 LMX1AQ8TE12 382 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 TMEM209Q96SK2 561 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 SGIP1Q9BQI5 828 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 PDLIM7Q9NR12 457 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 SIX4Q9UIU6 781 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 STYXL1Q9Y6J8 313 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 NRAPQ86VF7 1730 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 IGKV6D-21A0A0A0MT36 114 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 TPP1O14773 563 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 LIN7AO14910 233 aaPredicted RBP12.13□□□□□ -0.47
NR4A1-215ENST00000550557 CREB5Q02930 508 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 ZNF621Q6ZSS3 439 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 HFE2Q6ZVN8 426 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 TRPC4APQ8TEL6 797 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 ZNF599Q96NL3 588 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 PAAF1Q9BRP4 392 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 LRRC4CQ9HCJ2 640 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 KCNK4Q9NYG8 393 aa12.13□□□□□ -0.47
NR4A1-215ENST00000550557 hCG_2014768A0A024R1R8 64 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 IGKV6-21A0A0C4DH24 114 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 BANF1O75531 89 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 ZNF682O95780 498 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 MLYCDO95822 493 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 DNAJC14Q6Y2X3 702 aaPredicted RBP12.12□□□□□ -0.47
NR4A1-215ENST00000550557 FAM129CQ86XR2 697 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 RAD51AP1Q96B01 352 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 QKIQ96PU8 341 aaKnown RBP eCLIP12.12□□□□□ -0.47
NR4A1-215ENST00000550557 ZNF184Q99676 751 aaPredicted RBP12.12□□□□□ -0.47
NR4A1-215ENST00000550557 PIGVQ9NUD9 493 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 LGALS13Q9UHV8 139 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 MAPRE3Q9UPY8 281 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 VPS4BO75351 444 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 DUSP3P51452 185 aaPredicted RBP12.12□□□□□ -0.47
NR4A1-215ENST00000550557 GALNT4Q8N4A0 578 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 ZBTB2Q8N680 514 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 SRFBP1Q8NEF9 429 aaKnown RBP12.12□□□□□ -0.47
NR4A1-215ENST00000550557 DDX1Q92499 740 aaKnown RBP12.12□□□□□ -0.47
NR4A1-215ENST00000550557 URB1O60287 2271 aaKnown RBP12.12□□□□□ -0.47
NR4A1-215ENST00000550557 ERN1O75460 977 aaKnown RBP12.12□□□□□ -0.47
NR4A1-215ENST00000550557 MT-CYBP00156 380 aaPredicted RBP12.12□□□□□ -0.47
NR4A1-215ENST00000550557 PRKCGP05129 697 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 CSTF2P33240 577 aaKnown RBP eCLIP12.12□□□□□ -0.47
NR4A1-215ENST00000550557 CYP4F2P78329 520 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 CCDC92Q53HC0 331 aaPredicted RBP12.12□□□□□ -0.47
NR4A1-215ENST00000550557 C1orf220Q5T0J3 134 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 BHLHB9Q6PI77 547 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 LPCAT2Q7L5N7 544 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 SERPINA9Q86WD7 417 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 GKN2Q86XP6 184 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 PAIP2BQ9ULR5 123 aaKnown RBP12.12□□□□□ -0.47
NR4A1-215ENST00000550557 MEIS3P2A8K0S8 358 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 FOXO6A8MYZ6 492 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 C9J4A7 227 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 CLDN4O14493 209 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 OTCP00480 354 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 ATP5F1P24539 256 aaPredicted RBP12.12□□□□□ -0.47
NR4A1-215ENST00000550557 MYLK3Q32MK0 819 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 PITRM1Q5JRX3 1037 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 CLLU1OSQ5K130 101 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 PTCRAQ6ISU1 281 aaPredicted RBP12.12□□□□□ -0.47
NR4A1-215ENST00000550557 PRSS58Q8IYP2 241 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 DCAF4L2Q8NA75 395 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 SIKE1Q9BRV8 207 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 RAD21L1Q9H4I0 556 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 CAAP1Q9H8G2 361 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 VTI1BQ9UEU0 232 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 POLR1DQ9Y2S0 133 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 HS3ST4Q9Y661 456 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 ZNF780BQ9Y6R6 833 aa12.12□□□□□ -0.47
NR4A1-215ENST00000550557 KIAA1551Q9HCM1 1747 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 MYH4Q9Y623 1939 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 ITPKAP23677 461 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 NAE1Q13564 534 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 TCEAL5Q5H9L2 206 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 MS4A13Q5J8X5 152 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 C22orf39Q6P5X5 142 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 REXO5Q96IC2 774 aaKnown RBP12.11□□□□□ -0.47
NR4A1-215ENST00000550557 GPR174Q9BXC1 333 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 TCF7L2Q9NQB0 619 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 THAP1Q9NVV9 213 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 FKBPLQ9UIM3 349 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 OGDHLQ9ULD0 1010 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 HCN4Q9Y3Q4 1203 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 A0A1W2PPM1 405 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 HOXA11P31270 313 aaPredicted RBP12.11□□□□□ -0.47
NR4A1-215ENST00000550557 NAGLUP54802 743 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 NAA20P61599 178 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 TMPRSS11BQ86T26 416 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 PTCD2Q8WV60 388 aaKnown RBP12.11□□□□□ -0.47
NR4A1-215ENST00000550557 PHF21AQ96BD5 680 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 OSBPL6Q9BZF3 934 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 TELO2Q9Y4R8 837 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 UPK3BL1B0FP48 263 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms