RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 SFTPCP11686 197 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 HGFP14210 728 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 ITIH1P19827 911 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 COMTP21964 271 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 TSPAN7P41732 249 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 CDKN2BP42772 138 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 PPM1FP49593 454 aaPredicted RBP10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 ATP1A2P50993 1020 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 MAPK10P53779 464 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 RAB15P59190 212 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 HHEXQ03014 270 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 TBX2Q13207 712 aaPredicted RBP10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 TAZQ16635 292 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 TFDP3Q5H9I0 405 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 ZNF574Q6ZN55 896 aaPredicted RBP10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 TMPRSS9Q7Z410 1059 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 TRIM74Q86UV6 250 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 RNF214Q8ND24 703 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 SLC37A2Q8TED4 501 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 LRRN4Q8WUT4 740 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 TTC9Q92623 222 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 P3H4Q92791 437 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 TADA1Q96BN2 335 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 CCDC74BQ96LY2 380 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 TEFMQ96QE5 360 aaKnown RBP10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 SMIM14Q96QK8 99 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 WDR24Q96S15 920 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 NUDT22Q9BRQ3 303 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 ZPBPQ9BS86 351 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 DDA1Q9BW61 102 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 TRIM5Q9C035 493 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 ZMYND15Q9H091 742 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 UCK1Q9HA47 277 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 GLOD4Q9HC38 313 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 WDR70Q9NW82 654 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 HACD3Q9P035 362 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 PDP2Q9P2J9 529 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 FAM153AQ9UHL3 310 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 PLEKHM1Q9Y4G2 1056 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 ALG6Q9Y672 507 aa10.77□□□□□ -0.69
VTI1BP3-201ENST00000550220 LRRK1Q38SD2 2015 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 FADS2P1A8MWK0 482 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 HACD1B0YJ81 288 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 KMOO15229 486 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 CAPN5O15484 640 aaPredicted RBP10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 CST8O60676 142 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 PPFIA2O75334 1257 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 ZNF189O75820 626 aaPredicted RBP10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 LCA5LO95447 670 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 ATP1A1P05023 1023 aaKnown RBP10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 THRAP10827 490 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 F3P13726 295 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 TNNT1P13805 278 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 VCLP18206 1134 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 HMGCLP35914 325 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 DYNLT1P63172 113 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 GALNT3Q14435 633 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 C16orf72Q14CZ0 275 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 PRKD1Q15139 912 aaPredicted RBP10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 DCAF12Q5T6F0 453 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 SARM1Q6SZW1 724 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 MFSD7Q6UXD7 560 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 DTX1Q86Y01 620 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 KATNAL2Q8IYT4 538 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 ZNF843Q8N446 348 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 BRSK1Q8TDC3 778 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 PATE1Q8WXA2 126 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 GLYATL1Q969I3 302 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 SGF29Q96ES7 293 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 MED8Q96G25 268 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 RBM41Q96IZ5 413 aaKnown RBP10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 PLEKHG4BQ96PX9 1271 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 TRHDEQ9UKU6 1024 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 SHOC2Q9UQ13 582 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 ZNF711Q9Y462 761 aa10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 OAS3Q9Y6K5 1087 aaKnown RBP10.76□□□□□ -0.69
VTI1BP3-201ENST00000550220 BPTFQ12830 3046 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 LOC285095A0A1B0GVY8 99 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 C9orf172C9J069 976 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 CHUKO15111 745 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 EFSO43281 561 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 PMPCBO75439 489 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 IPO7O95373 1038 aaKnown RBP10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 CCL4P13236 92 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 ACP5P13686 325 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 XRCC1P18887 633 aaPredicted RBP10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 PTPN3P26045 913 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 CYLC1P35663 651 aaPredicted RBP10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 COPS2P61201 443 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 MPP3Q13368 585 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 XRCC4Q13426 336 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 GTF2H3Q13889 308 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 PCSK7Q16549 785 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 NKAIN2Q5VXU1 208 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 PCSK4Q6UW60 755 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 NPNTQ6UXI9 565 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 SPOCD1Q6ZMY3 1216 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 PID1Q7Z2X4 250 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 KDELC2Q7Z4H8 507 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms