RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 CLSTN3Q9BQT9 956 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 MRPL46Q9H2W6 279 aaKnown RBP11.04□□□□□ -0.64
LINC00661-204ENST00000549354 ZNF696Q9H7X3 374 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 SP110Q9HB58 689 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 TMEM39AQ9NV64 488 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 UXTQ9UBK9 157 aaPredicted RBP11.04□□□□□ -0.64
LINC00661-204ENST00000549354 DOCK4Q8N1I0 1966 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 NYNRINQ9P2P1 1898 aaKnown RBP11.03□□□□□ -0.64
LINC00661-204ENST00000549354 SUPT3HB4E1H0 165 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 PEX11BO96011 259 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 ATP6V1B2P21281 511 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 FUT4P22083 530 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 PRDX3P30048 256 aaKnown RBP11.03□□□□□ -0.64
LINC00661-204ENST00000549354 CD151P48509 253 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 NPY2RP49146 381 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 GRB7Q14451 532 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 ALFQ53S48 1182 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 C6orf10Q5SRN2 563 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 TIGD7Q6NT04 549 aaPredicted RBP11.03□□□□□ -0.64
LINC00661-204ENST00000549354 DHFR2Q86XF0 187 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 CCDC117Q8IWD4 279 aaPredicted RBP11.03□□□□□ -0.64
LINC00661-204ENST00000549354 CMTR2Q8IYT2 770 aaKnown RBP11.03□□□□□ -0.64
LINC00661-204ENST00000549354 PTGR2Q8N8N7 351 aaPredicted RBP11.03□□□□□ -0.64
LINC00661-204ENST00000549354 MAGEE2Q8TD90 523 aaPredicted RBP11.03□□□□□ -0.64
LINC00661-204ENST00000549354 MTFMTQ96DP5 389 aaKnown RBP11.03□□□□□ -0.64
LINC00661-204ENST00000549354 RPRD1AQ96P16 312 aaPredicted RBP11.03□□□□□ -0.64
LINC00661-204ENST00000549354 SEPT5Q99719 369 aaPredicted RBP11.03□□□□□ -0.64
LINC00661-204ENST00000549354 TBCDQ9BTW9 1192 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 MARCH2Q9P0N8 246 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 MAFFQ9ULX9 164 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 VPS4AQ9UN37 437 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 U3KQV3 271 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 MAGEB16A2A368 324 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 UPK3BL1B0FP48 263 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 UPK3BL2E5RIL1 263 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 J3QRK9 145 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 KIAA0355O15063 1070 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 HTRA2O43464 458 aaPredicted RBP11.03□□□□□ -0.64
LINC00661-204ENST00000549354 EFCAB14O75071 495 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 AGTR2P50052 363 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 PRKCQQ04759 706 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 ATP1A4Q13733 1029 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 LAPTM4AQ15012 233 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 POTEHQ6S545 545 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 CHERPQ8IWX8 916 aaKnown RBP11.03□□□□□ -0.64
LINC00661-204ENST00000549354 SKA2Q8WVK7 121 aaPredicted RBP11.03□□□□□ -0.64
LINC00661-204ENST00000549354 FBXL8Q96CD0 374 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 ASB9Q96DX5 294 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 ZYG11BQ9C0D3 744 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 SPAG4Q9NPE6 437 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 AASSQ9UDR5 926 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 ZMYM5Q9UJ78 669 aa11.03□□□□□ -0.64
LINC00661-204ENST00000549354 A0A1W2PPW3 197 aa11.02□□□□□ -0.64
LINC00661-204ENST00000549354 TIMP1P01033 207 aa11.02□□□□□ -0.64
LINC00661-204ENST00000549354 TPP2P29144 1249 aaPredicted RBP11.02□□□□□ -0.64
LINC00661-204ENST00000549354 MAGEA12P43365 314 aa11.02□□□□□ -0.64
LINC00661-204ENST00000549354 EMP3P54852 163 aa11.02□□□□□ -0.64
LINC00661-204ENST00000549354 LSM3P62310 102 aaKnown RBP11.02□□□□□ -0.64
LINC00661-204ENST00000549354 CTBSQ01459 385 aa11.02□□□□□ -0.64
LINC00661-204ENST00000549354 LINGO4Q6UY18 593 aa11.02□□□□□ -0.64
LINC00661-204ENST00000549354 CLHC1Q8NHS4 586 aa11.02□□□□□ -0.64
LINC00661-204ENST00000549354 ZNF461Q8TAF7 563 aa11.02□□□□□ -0.64
LINC00661-204ENST00000549354 SMPD4Q9NXE4 827 aa11.02□□□□□ -0.64
LINC00661-204ENST00000549354 CROTQ9UKG9 612 aa11.02□□□□□ -0.64
LINC00661-204ENST00000549354 AP1G1O43747 822 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 HMGA1P17096 107 aaKnown RBP11.02□□□□□ -0.65
LINC00661-204ENST00000549354 ARNTP27540 789 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 OXTRP30559 389 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 OR1D2P34982 312 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 HADHAP40939 763 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 IST1P53990 364 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 RHDQ02161 417 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 STX5Q13190 355 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 APOFQ13790 326 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 C18orf21Q32NC0 220 aaPredicted RBP11.02□□□□□ -0.65
LINC00661-204ENST00000549354 FBXO46Q6PJ61 603 aaPredicted RBP11.02□□□□□ -0.65
LINC00661-204ENST00000549354 C16orf59Q7L2K0 433 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 GPR141Q7Z602 305 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 RETREG3Q86VR2 466 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 FIBCD1Q8N539 461 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 PSD4Q8NDX1 1056 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 DDI1Q8WTU0 396 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 THAP11Q96EK4 314 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 TRMT2BQ96GJ1 504 aaKnown RBP11.02□□□□□ -0.65
LINC00661-204ENST00000549354 CCDC90BQ9GZT6 254 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 MUC3BQ9H195 1237 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 ADNPQ9H2P0 1102 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 SMOXQ9NWM0 555 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 AAR2Q9Y312 384 aaKnown RBP11.02□□□□□ -0.65
LINC00661-204ENST00000549354 A8MT66 165 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 NRP2O60462 931 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 SRP72O76094 671 aaKnown RBP11.02□□□□□ -0.65
LINC00661-204ENST00000549354 SNRPB2P08579 225 aaKnown RBP11.02□□□□□ -0.65
LINC00661-204ENST00000549354 EFNA1P20827 205 aaPredicted RBP11.02□□□□□ -0.65
LINC00661-204ENST00000549354 ADRA1AP35348 466 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 ACVRL1P37023 503 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 CDKN2DP55273 166 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 STX1BP61266 288 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 C10orf120Q5SQS8 335 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 OGFOD2Q6N063 350 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms