RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ZIC1Q15915 447 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 ZNF805Q5CZA5 627 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 C22orf39Q6P5X5 142 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 ABRAXAS1Q6UWZ7 409 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 SNX20Q7Z614 316 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 ZC3HC1Q86WB0 502 aaKnown RBP4.86□□□□□ -1.63
SCAF11-212ENST00000549162 SLC43A2Q8N370 569 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 OR8K5Q8NH50 307 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 OR56A3Q8NH54 315 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 TSPAN17Q96FV3 270 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 GDAP1L1Q96MZ0 367 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 LRFN5Q96NI6 719 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 FMO2Q99518 471 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 C11orf70Q9BRQ4 267 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 AARSD1Q9BTE6 412 aaKnown RBP4.86□□□□□ -1.63
SCAF11-212ENST00000549162 RAB11FIP5Q9BXF6 653 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 TKTL2Q9H0I9 626 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 EPN3Q9H201 632 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 IFT22Q9H7X7 185 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 TRIM45Q9H8W5 580 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-212ENST00000549162 MAN1C1Q9NR34 630 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 HEBP1Q9NRV9 189 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 NUDT4Q9NZJ9 180 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 APPL1Q9UKG1 709 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 EMCNQ9ULC0 261 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-212ENST00000549162 C2orf92A0A1B0GVN3 265 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 LILRA5A6NI73 299 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 FAM72CH0Y354 149 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 TLR5O60602 858 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 GJB3O75712 270 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 HEXIM1O94992 359 aaKnown RBP4.86□□□□□ -1.63
SCAF11-212ENST00000549162 PROCP04070 461 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 RBP3P10745 1247 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 NAT2P11245 290 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 RAG1P15918 1043 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 ZP2Q05996 745 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 TWF1Q12792 350 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 MTAPQ13126 283 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 WSCD2Q2TBF2 565 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 C4orf17Q53FE4 359 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 TECRLQ5HYJ1 363 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 FAM72AQ5TYM5 149 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 BTBD8Q5XKL5 378 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 FAM72DQ6L9T8 149 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 C16orf54Q6UWD8 224 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 LRRC70Q7Z2Q7 622 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 PRSS42Q7Z5A4 293 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 FAM72BQ86X60 149 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 KBTBD2Q8IY47 623 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 DPP10Q8N608 796 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 C12orf29Q8N999 325 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 OR2AP1Q8NGE2 309 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 OR6B3Q8NGW1 331 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 OR2T3Q8NH03 318 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 WDR48Q8TAF3 677 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 MIPOL1Q8TD10 442 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 FBXO32Q969P5 355 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 KIAA1191Q96A73 305 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 DTD2Q96FN9 168 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 CCDC115Q96NT0 180 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 FAM193BQ96PV7 902 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-212ENST00000549162 SH2D3AQ9BRG2 576 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 CAPS2Q9BXY5 557 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 THG1LQ9NWX6 298 aaKnown RBP4.86□□□□□ -1.63
SCAF11-212ENST00000549162 PTBP2Q9UKA9 531 aaKnown RBP4.86□□□□□ -1.63
SCAF11-212ENST00000549162 CNOT11Q9UKZ1 510 aaKnown RBP4.86□□□□□ -1.63
SCAF11-212ENST00000549162 TMPRSS11EQ9UL52 423 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 F5H423 210 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 SASH3O75995 380 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 B3GAT3O94766 335 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 HLA-DQB2P05538 268 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 TCF4P15884 667 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 ACRV1P26436 265 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 GABRA4P48169 554 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 PGFP49763 221 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 PAPOLAP51003 745 aaKnown RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 KPNA2P52292 529 aaKnown RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 AP1S2P56377 157 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 EIF3EP60228 445 aaKnown RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 PRPSAP1Q14558 356 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 CASP8Q14790 479 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 ODF1Q14990 250 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 KANK2Q63ZY3 851 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 C8orf74Q6P047 294 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 LRRC31Q6UY01 552 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 ASB18Q6ZVZ8 466 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 ASRGL1Q7L266 308 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 OR6C4Q8NGE1 309 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 GPBAR1Q8TDU6 330 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 TMEM159Q96B96 161 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 ATOH8Q96SQ7 321 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 CYTH2Q99418 400 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 NPLQ9BXD5 320 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 EPC1Q9H2F5 836 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 PDCL3Q9H2J4 239 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 TLK1Q9UKI8 766 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 DHRS7Q9Y394 339 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 TMED5Q9Y3A6 229 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 PTPRBP23467 1997 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms