RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 KLHDC10Q6PID8 442 aa13.58□□□□□ -0.24
PRPF40B-209ENST00000548825 MBOAT1Q6ZNC8 495 aa13.58□□□□□ -0.24
PRPF40B-209ENST00000548825 COLGALT2Q8IYK4 626 aa13.58□□□□□ -0.24
PRPF40B-209ENST00000548825 ZFP28Q8NHY6 868 aa13.58□□□□□ -0.24
PRPF40B-209ENST00000548825 FBXO30Q8TB52 745 aa13.58□□□□□ -0.24
PRPF40B-209ENST00000548825 LINC01599Q8WXQ3 324 aa13.58□□□□□ -0.24
PRPF40B-209ENST00000548825 MYLIPQ8WY64 445 aa13.58□□□□□ -0.24
PRPF40B-209ENST00000548825 FIG4Q92562 907 aa13.58□□□□□ -0.24
PRPF40B-209ENST00000548825 DPF3Q92784 378 aa13.58□□□□□ -0.24
PRPF40B-209ENST00000548825 FAR2Q96K12 515 aa13.58□□□□□ -0.24
PRPF40B-209ENST00000548825 PKMYT1Q99640 499 aa13.58□□□□□ -0.24
PRPF40B-209ENST00000548825 RHBDL2Q9NX52 303 aa13.58□□□□□ -0.24
PRPF40B-209ENST00000548825 SEPT3Q9UH03 358 aa13.58□□□□□ -0.24
PRPF40B-209ENST00000548825 MAGED1Q9Y5V3 778 aaPredicted RBP13.58□□□□□ -0.24
PRPF40B-209ENST00000548825 CCDC154A6NI56 674 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 HNRNPRO43390 633 aaKnown RBP13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 NDST3O95803 873 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 FGF1P05230 155 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 TFAP2AP05549 437 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 PSMA4P25789 261 aaKnown RBP13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 RANBP1P43487 201 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 RPL5P46777 297 aaKnown RBP13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 HSPA7P48741 367 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 HTR6P50406 440 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 STC1P52823 247 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 HMGCS1Q01581 520 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 LRP8Q14114 963 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 CHSY3Q70JA7 882 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 SNRNP27Q8WVK2 155 aaKnown RBP13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 UBXN10Q96LJ8 280 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 NSMCE3Q96MG7 304 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 TSPAN18Q96SJ8 248 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 PKP3Q9Y446 797 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 ADAMTS4O75173 837 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 SLC2A4P14672 509 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 WEE1P30291 646 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 HMOX2P30519 316 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 ALDH7A1P49419 539 aaKnown RBP13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 IL10RBQ08334 325 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 CDH18Q13634 790 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 IKBKEQ14164 716 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 PAGE3Q5JUK9 113 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 PTCD2Q8WV60 388 aaKnown RBP13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 SLC39A13Q96H72 371 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 MCMBPQ9BTE3 642 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 BOCQ9BWV1 1114 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 FAM192AQ9GZU8 254 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 ADNPQ9H2P0 1102 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 MEAF6Q9HAF1 191 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 GNGT2O14610 69 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 TBL1XO60907 577 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 GSNP06396 782 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 CAPN1P07384 714 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 RHDQ02161 417 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 ARHGEF7Q14155 803 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 CYHR1Q6ZMK1 362 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 ADCY4Q8NFM4 1077 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 DDI1Q8WTU0 396 aa13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.57□□□□□ -0.24
PRPF40B-209ENST00000548825 EI24O14681 340 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 INSIG1O15503 277 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 TYMPP19971 482 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 HLA-DPA1P20036 260 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 IL2P60568 153 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 LAPTM5Q13571 262 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 CMPK2Q5EBM0 449 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 LARP4Q71RC2 724 aaKnown RBP eCLIP13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 ADGRG6Q86SQ4 1221 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 SYVN1Q86TM6 617 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 CLVS1Q8IUQ0 354 aaPredicted RBP13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 SLC15A3Q8IY34 581 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 CLEC4FQ8N1N0 589 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 CPSF7Q8N684 471 aaKnown RBP13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 PCSK9Q8NBP7 692 aaKnown RBP13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 RMND5BQ96G75 393 aaPredicted RBP13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 C17orf80Q9BSJ5 609 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 DNMT3LQ9UJW3 386 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 POLR3HQ9Y535 204 aaPredicted RBP13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 ACSL4O60488 711 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 PRAMEF11O60813 436 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 LRATO95237 230 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 PYGLP06737 847 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 MTHFD2P13995 350 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 PCSK6P29122 969 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 IST1P53990 364 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 SMAD3P84022 425 aaKnown RBP13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 DDX39BQ13838 428 aaKnown RBP13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 LPCAT2Q7L5N7 544 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 ANKRD46Q86W74 232 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 FAM126BQ8IXS8 530 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 SLC22A15Q8IZD6 547 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 ARHGAP18Q8N392 663 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 CATSPER1Q8NEC5 780 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 OR2T34Q8NGX1 318 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 OR2T3Q8NH03 318 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 ULK4Q96C45 1275 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 AARSD1Q9BTE6 412 aaKnown RBP13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 MAP10Q9P2G4 905 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 TMEM88BA6NKF7 163 aa13.56□□□□□ -0.24
PRPF40B-209ENST00000548825 SLC38A8A6NNN8 435 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms