RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 PROX2Q3B8N5 592 aa19.93■□□□□ 0.78
CTDSP2-204ENST00000548823 CERCAMQ5T4B2 595 aa19.93■□□□□ 0.78
CTDSP2-204ENST00000548823 ALG1LQ6GMV1 187 aa19.93■□□□□ 0.78
CTDSP2-204ENST00000548823 CPLX4Q7Z7G2 160 aa19.93■□□□□ 0.78
CTDSP2-204ENST00000548823 FAM217AQ8IXS0 508 aa19.93■□□□□ 0.78
CTDSP2-204ENST00000548823 ACMSDQ8TDX5 336 aa19.93■□□□□ 0.78
CTDSP2-204ENST00000548823 CYB5D2Q8WUJ1 264 aa19.93■□□□□ 0.78
CTDSP2-204ENST00000548823 APOPT1Q96IL0 206 aa19.93■□□□□ 0.78
CTDSP2-204ENST00000548823 MRGPRX2Q96LB1 330 aa19.93■□□□□ 0.78
CTDSP2-204ENST00000548823 CPNE1Q99829 537 aa19.93■□□□□ 0.78
CTDSP2-204ENST00000548823 TRIM56Q9BRZ2 755 aaKnown RBP19.93■□□□□ 0.78
CTDSP2-204ENST00000548823 FAM117AQ9C073 453 aa19.93■□□□□ 0.78
CTDSP2-204ENST00000548823 TBC1D30Q9Y2I9 924 aa19.93■□□□□ 0.78
CTDSP2-204ENST00000548823 K7ENP7 123 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 PIAS1O75925 651 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 MT-CYBP00156 380 aaPredicted RBP19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 RPA3P35244 121 aaPredicted RBP19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 LSSP48449 732 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 CCT5P48643 541 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 NEK3P51956 506 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 HNRNPH2P55795 449 aaKnown RBP19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 NXPH1P58417 271 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 OLIG2Q13516 323 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 RFTN1Q14699 578 aaPredicted RBP19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 LBRQ14739 615 aaKnown RBP19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 LRRC14Q15048 493 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 GRTP1Q5TC63 336 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 RFWD3Q6PCD5 774 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 INO80CQ6PI98 192 aaPredicted RBP19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 NCEH1Q6PIU2 408 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 MGARPQ8TDB4 240 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 WFIKKN2Q8TEU8 576 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 ZNF669Q96BR6 464 aaPredicted RBP19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 SERAC1Q96JX3 654 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 PRICKLE1Q96MT3 831 aaPredicted RBP19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 RANBP9Q96S59 729 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 FICDQ9BVA6 458 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 TRIM4Q9C037 500 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 NT5MQ9NPB1 228 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 NSMCE4AQ9NXX6 385 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 SUN2Q9UH99 717 aa19.92■□□□□ 0.78
CTDSP2-204ENST00000548823 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 TLR4O00206 839 aa19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 KDELR3O43731 214 aa19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 HOXD9P28356 352 aaPredicted RBP19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 GP5P40197 560 aa19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 SFSWAPQ12872 951 aaKnown RBP19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 ZNF177Q13360 481 aaPredicted RBP19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 KIAA1614Q5VZ46 1190 aa19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 PACS1Q6VY07 963 aa19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 PIGWQ7Z7B1 504 aa19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 CIR1Q86X95 450 aaPredicted RBP19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 LRRC34Q8IZ02 419 aa19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 BBS5Q8N3I7 341 aa19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 IPMKQ8NFU5 416 aa19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 GANCQ8TET4 914 aa19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 POLR1BQ9H9Y6 1135 aa19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 PIH1D1Q9NWS0 290 aaKnown RBP19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 FBXL12Q9NXK8 326 aa19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 UBP1Q9NZI7 540 aa19.91■□□□□ 0.78
CTDSP2-204ENST00000548823 LRRC72A6NJI9 287 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 TERTO14746 1132 aaKnown RBP19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 WNT9AO14904 365 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 ATP9BO43861 1147 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 UGT1A9O60656 530 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 RFPL1O75677 317 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 DHRS4L1P0CG22 281 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 HLA-FP30511 346 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 ACVRL1P37023 503 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 CSE1LP55060 971 aaKnown RBP19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 WNT3AP56704 352 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 NFATC3Q12968 1075 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 SLC1A5Q15758 541 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 PDK4Q16654 411 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 GKAP1Q5VSY0 366 aaPredicted RBP19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 HHATQ5VTY9 493 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 CDCP2Q5VXM1 449 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 PDPK2PQ6A1A2 396 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 MICALCLQ6ZW33 695 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 CFAP52Q8N1V2 620 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 ARRDC2Q8TBH0 407 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 APOL2Q9BQE5 337 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 FSD1LQ9BXM9 530 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 POLR1EQ9GZS1 481 aaKnown RBP19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 RSPH9Q9H1X1 276 aaPredicted RBP19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 VPS11Q9H270 941 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 UGT1A7Q9HAW7 530 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 UGT1A10Q9HAW8 530 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 UGT1A8Q9HAW9 530 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 ASCL3Q9NQ33 180 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 THSD1Q9NS62 852 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 ZFATQ9P243 1243 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 UNC79Q9P2D8 2635 aa19.9■□□□□ 0.78
CTDSP2-204ENST00000548823 HMX2A2RU54 273 aa19.89■□□□□ 0.77
CTDSP2-204ENST00000548823 C10orf142B7Z368 130 aa19.89■□□□□ 0.77
CTDSP2-204ENST00000548823 EPOP01588 193 aa19.89■□□□□ 0.77
CTDSP2-204ENST00000548823 MMP2P08253 660 aa19.89■□□□□ 0.77
CTDSP2-204ENST00000548823 VIMP08670 466 aaKnown RBP19.89■□□□□ 0.77
CTDSP2-204ENST00000548823 CES1P23141 567 aa19.89■□□□□ 0.77
CTDSP2-204ENST00000548823 ADRA1DP25100 572 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms