RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 VCYO14598 125 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 SYF2O95926 243 aaKnown RBP4.13□□□□□ -1.75
PTCH1-216ENST00000548379 SRPRAP08240 638 aaKnown RBP4.13□□□□□ -1.75
PTCH1-216ENST00000548379 EIF2DP41214 584 aaKnown RBP4.13□□□□□ -1.75
PTCH1-216ENST00000548379 PIK3CAP42336 1068 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 GALCP54803 685 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 SNX16P57768 344 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 MRPS21P82921 87 aaKnown RBP4.13□□□□□ -1.75
PTCH1-216ENST00000548379 Q0VFX4 171 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 NAB2Q15742 525 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 RARS2Q5T160 578 aaKnown RBP4.13□□□□□ -1.75
PTCH1-216ENST00000548379 OTUD1Q5VV17 481 aaPredicted RBP4.13□□□□□ -1.75
PTCH1-216ENST00000548379 KRT74Q7RTS7 529 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 IRF2BP2Q7Z5L9 587 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 TECPR1Q7Z6L1 1165 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 ADGRA1Q86SQ6 560 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 PRPF39Q86UA1 669 aaKnown RBP4.13□□□□□ -1.75
PTCH1-216ENST00000548379 PIM3Q86V86 326 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 TICAM2Q86XR7 235 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 FOXRED2Q8IWF2 684 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 TAGAPQ8N103 731 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 SCML4Q8N228 414 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 C17orf53Q8N3J3 647 aaPredicted RBP4.13□□□□□ -1.75
PTCH1-216ENST00000548379 IL17RCQ8NAC3 791 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 CLEC18CQ8NCF0 446 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 C1orf131Q8NDD1 294 aaKnown RBP4.13□□□□□ -1.75
PTCH1-216ENST00000548379 SLC22A18Q96BI1 424 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 HARBI1Q96MB7 349 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 ZNF778Q96MU6 729 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 LRFN5Q96NI6 719 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 FIZ1Q96SL8 496 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 TEX12Q9BXU0 123 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 PLK3Q9H4B4 646 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 MAGIXQ9H6Y5 334 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 PPP1R3EQ9H7J1 279 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 GPR108Q9NPR9 543 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 UBA2Q9UBT2 640 aaPredicted RBP4.13□□□□□ -1.75
PTCH1-216ENST00000548379 RPS6KA6Q9UK32 745 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 ACSL5Q9ULC5 683 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 EXO1Q9UQ84 846 aaKnown RBP4.13□□□□□ -1.75
PTCH1-216ENST00000548379 CMAHPQ9Y471 501 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 CLIC4Q9Y696 253 aa4.13□□□□□ -1.75
PTCH1-216ENST00000548379 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.12□□□□□ -1.75
PTCH1-216ENST00000548379 CKAP5Q14008 2032 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 UNC13BO14795 1591 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 C1orf226A1L170 272 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 CPED1A4D0V7 1026 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 AKR1B15C9JRZ8 316 aaPredicted RBP4.12□□□□□ -1.75
PTCH1-216ENST00000548379 SH2B2O14492 632 aaPredicted RBP4.12□□□□□ -1.75
PTCH1-216ENST00000548379 TNFRSF13BO14836 293 aaPredicted RBP4.12□□□□□ -1.75
PTCH1-216ENST00000548379 ITM2AO43736 263 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 MITFO75030 526 aaPredicted RBP4.12□□□□□ -1.75
PTCH1-216ENST00000548379 TPPPO94811 219 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 CSPG5O95196 566 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 ACTN1P12814 892 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 NNMTP40261 264 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 EIF2S3P41091 472 aaKnown RBP4.12□□□□□ -1.75
PTCH1-216ENST00000548379 SLC15A1P46059 708 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 AMTP48728 403 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 ENTPD1P49961 510 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 MXI1P50539 228 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 HSD17B4P51659 736 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 NUDT6P53370 316 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 ABATP80404 500 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 MRPS5P82675 430 aaKnown RBP4.12□□□□□ -1.75
PTCH1-216ENST00000548379 PPATQ06203 517 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 IKQ13123 557 aaPredicted RBP4.12□□□□□ -1.75
PTCH1-216ENST00000548379 EIF2S3LQ2VIR3 472 aaKnown RBP4.12□□□□□ -1.75
PTCH1-216ENST00000548379 FSCBQ5H9T9 825 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 FNBP1LQ5T0N5 605 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 CFAP58Q5T655 872 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 FAM69BQ5VUD6 431 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 GGNBP1Q5YKI7 109 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 B3GNT6Q6ZMB0 384 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 CACNA2D4Q7Z3S7 1137 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 TEX11Q8IYF3 940 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 POC5Q8NA72 575 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 MIGA1Q8NAN2 632 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 C1QTNF1Q9BXJ1 281 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 NDST4Q9H3R1 872 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 SLC28A3Q9HAS3 691 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 GIMAP4Q9NUV9 329 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 MORF4L1Q9UBU8 362 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 FBXW11Q9UKB1 542 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 RCOR1Q9UKL0 485 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 AGO1Q9UL18 857 aaKnown RBP4.12□□□□□ -1.75
PTCH1-216ENST00000548379 PADI1Q9ULC6 663 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 CDC14AQ9UNH5 594 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 CROCC2H7BZ55 1655 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 TTC3P53804 2025 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 GPRASP1Q5JY77 1395 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 ABCC11Q96J66 1382 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 ANKRD30BQ9BXX2 1392 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 NAIPQ13075 1403 aa4.12□□□□□ -1.75
PTCH1-216ENST00000548379 A0A1B0GVT2 93 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 ATP2A1O14983 1001 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 ASAP2O43150 1006 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 ADAM20O43506 726 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 ZIC3O60481 467 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 DDNO94850 711 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms