RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 MGAQ8IWI9 3026 aa12.03□□□□□ -0.48
HDAC7-226ENST00000547259 ZNF462Q96JM2 2506 aa12.03□□□□□ -0.48
HDAC7-226ENST00000547259 HEATR9A2RTY3 570 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 TSPAN6O43657 245 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 SIGLEC6O43699 453 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 TLX3O43711 291 aaPredicted RBP12.02□□□□□ -0.49
HDAC7-226ENST00000547259 CLDN7O95471 211 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 MT-CO3P00414 261 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 GP1BAP07359 652 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 THEGLP0DJG4 465 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 ZNF30P17039 623 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 HNRNPA2B1P22626 353 aaKnown RBP12.02□□□□□ -0.49
HDAC7-226ENST00000547259 LHCGRP22888 699 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 MCM3P25205 808 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 ITPKBP27987 946 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 TNFRSF8P28908 595 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 MAGEA3P43357 314 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 TAS2R38P59533 333 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 CRADDP78560 199 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 INSM1Q01101 510 aaPredicted RBP12.02□□□□□ -0.49
HDAC7-226ENST00000547259 DHX9Q08211 1270 aaKnown RBP12.02□□□□□ -0.49
HDAC7-226ENST00000547259 RALGDSQ12967 914 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 PDIA2Q13087 525 aaKnown RBP12.02□□□□□ -0.49
HDAC7-226ENST00000547259 CNGA3Q16281 694 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 TMEM52BQ4KMG9 183 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 CCDC38Q502W7 563 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 FNBP1LQ5T0N5 605 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 LRRC66Q68CR7 880 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 CRTC1Q6UUV9 634 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 TSPAN33Q86UF1 283 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 GSPT2Q8IYD1 628 aaKnown RBP12.02□□□□□ -0.49
HDAC7-226ENST00000547259 BRSK1Q8TDC3 778 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 WBP1Q96G27 269 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 DEPDC7Q96QD5 511 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 RANBP9Q96S59 729 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 FMO2Q99518 471 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 FOXP3Q9BZS1 431 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 TRABDQ9H4I3 376 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 ZFYVE1Q9HBF4 777 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 MAD1L1Q9Y6D9 718 aa12.02□□□□□ -0.49
HDAC7-226ENST00000547259 A0A0U1RQS6 177 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 CCDC78A2IDD5 438 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 SDR42E2A6NKP2 422 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 C2orf81A6NN90 581 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 BRINP1O60477 761 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 BANF1O75531 89 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 CKMT1AP12532 417 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 DGKAP23743 735 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 ADRA1DP25100 572 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 ECHS1P30084 290 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 LIG3P49916 1009 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 PCBP4P57723 403 aaKnown RBP12.01□□□□□ -0.49
HDAC7-226ENST00000547259 ERVPABLB-1P60509 514 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 HNRNPKP61978 463 aaKnown RBP eCLIP12.01□□□□□ -0.49
HDAC7-226ENST00000547259 PDE1BQ01064 536 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 LAMB3Q13751 1172 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 ACOX1Q15067 660 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 TAF1AQ15573 450 aaPredicted RBP12.01□□□□□ -0.49
HDAC7-226ENST00000547259 MSS51Q4VC12 460 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 PCID2Q5JVF3 399 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 KIAA1161Q6NSJ0 714 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 CEP128Q6ZU80 1094 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 ZNF605Q86T29 641 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 HORMAD1Q86X24 394 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 MPP5Q8N3R9 675 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 TTC30BQ8N4P2 665 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 TMEM145Q8NBT3 493 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 STAMBPL1Q96FJ0 436 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 PHACTR1Q9C0D0 580 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 ABCG4Q9H172 646 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 SAYSD1Q9NPB0 183 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 NLGN3Q9NZ94 848 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 PKD2L2Q9NZM6 624 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 CHMP2BQ9UQN3 213 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 TCAF1Q9Y4C2 921 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 HS3ST3A1Q9Y663 406 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 ARL5AQ9Y689 179 aa12.01□□□□□ -0.49
HDAC7-226ENST00000547259 A0A1W2PQU0 124 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 A6NNZ2 444 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 E7ESA3 106 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 H3BM21 787 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 ERVH48-1M5A8F1 160 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 PSMD11O00231 422 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 AURKAO14965 403 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 EIF3HO15372 352 aaKnown RBP eCLIP12□□□□□ -0.49
HDAC7-226ENST00000547259 STX7O15400 261 aaKnown RBP12□□□□□ -0.49
HDAC7-226ENST00000547259 SLC31A1O15431 190 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 BUD23O43709 281 aaKnown RBP12□□□□□ -0.49
HDAC7-226ENST00000547259 LZTS3O60299 673 aaPredicted RBP12□□□□□ -0.49
HDAC7-226ENST00000547259 MMP20O60882 483 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 DXOO77932 396 aaKnown RBP12□□□□□ -0.49
HDAC7-226ENST00000547259 C6P13671 934 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 LPOP22079 712 aaPredicted RBP12□□□□□ -0.49
HDAC7-226ENST00000547259 ELK3P41970 407 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 STC1P52823 247 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 VSNL1P62760 191 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 RPS21P63220 83 aaKnown RBP12□□□□□ -0.49
HDAC7-226ENST00000547259 RHDQ02161 417 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 MSLNQ13421 630 aaPredicted RBP12□□□□□ -0.49
HDAC7-226ENST00000547259 NAA30Q147X3 362 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms