RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 RFPL2O75678 378 aa6.06□□□□□ -1.44
NPAS3-204ENST00000546849 NGFRP08138 427 aa6.06□□□□□ -1.44
NPAS3-204ENST00000546849 RAD52P43351 418 aa6.06□□□□□ -1.44
NPAS3-204ENST00000546849 FASLGP48023 281 aa6.06□□□□□ -1.44
NPAS3-204ENST00000546849 MRPS5P82675 430 aaKnown RBP6.06□□□□□ -1.44
NPAS3-204ENST00000546849 GPR139Q6DWJ6 353 aa6.06□□□□□ -1.44
NPAS3-204ENST00000546849 RHBDF2Q6PJF5 856 aa6.06□□□□□ -1.44
NPAS3-204ENST00000546849 SCYL3Q8IZE3 742 aa6.06□□□□□ -1.44
NPAS3-204ENST00000546849 KCNH5Q8NCM2 988 aa6.06□□□□□ -1.44
NPAS3-204ENST00000546849 OR2AK2Q8NG84 335 aa6.06□□□□□ -1.44
NPAS3-204ENST00000546849 B4GALNT2Q8NHY0 566 aa6.06□□□□□ -1.44
NPAS3-204ENST00000546849 RTP4Q96DX8 246 aa6.06□□□□□ -1.44
NPAS3-204ENST00000546849 MED30Q96HR3 178 aa6.06□□□□□ -1.44
NPAS3-204ENST00000546849 QRFPRQ96P65 431 aa6.06□□□□□ -1.44
NPAS3-204ENST00000546849 KCNN2Q9H2S1 579 aa6.06□□□□□ -1.44
NPAS3-204ENST00000546849 GIMAP4Q9NUV9 329 aa6.06□□□□□ -1.44
NPAS3-204ENST00000546849 MTMR10Q9NXD2 777 aa6.06□□□□□ -1.44
NPAS3-204ENST00000546849 MALT1Q9UDY8 824 aa6.06□□□□□ -1.44
NPAS3-204ENST00000546849 PPIEQ9UNP9 301 aaKnown RBP6.06□□□□□ -1.44
NPAS3-204ENST00000546849 VDAC3Q9Y277 283 aa6.06□□□□□ -1.44
NPAS3-204ENST00000546849 ZNF644Q9H582 1327 aaPredicted RBP6.05□□□□□ -1.44
NPAS3-204ENST00000546849 SMAD9O15198 467 aaKnown RBP6.05□□□□□ -1.44
NPAS3-204ENST00000546849 KCNK5O95279 499 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 ACSL1P33121 698 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 TMPOP42166 694 aaKnown RBP6.05□□□□□ -1.44
NPAS3-204ENST00000546849 STAT2P52630 851 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 BNC1Q01954 994 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 LTBQ06643 244 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 RARS2Q5T160 578 aaKnown RBP6.05□□□□□ -1.44
NPAS3-204ENST00000546849 FOXRED2Q8IWF2 684 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 BEST3Q8N1M1 668 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 NEXN-AS1Q8NBZ9 246 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 UTP15Q8TED0 518 aaKnown RBP6.05□□□□□ -1.44
NPAS3-204ENST00000546849 TRPC4APQ8TEL6 797 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 TANKQ92844 425 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 TMEM19Q96HH6 336 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 ZNF479Q96JC4 524 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 ADGRG7Q96K78 797 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 EGLN2Q96KS0 407 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 LYZL4Q96KX0 146 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 KIFC3Q9BVG8 833 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 PSD3Q9NYI0 1048 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 SMARCAL1Q9NZC9 954 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 ZNF224Q9NZL3 707 aa6.05□□□□□ -1.44
NPAS3-204ENST00000546849 SEC63Q9UGP8 760 aaKnown RBP6.05□□□□□ -1.44
NPAS3-204ENST00000546849 EXO1Q9UQ84 846 aaKnown RBP6.05□□□□□ -1.44
NPAS3-204ENST00000546849 PTRH2Q9Y3E5 179 aaKnown RBP6.05□□□□□ -1.44
NPAS3-204ENST00000546849 LOC100509620A0A075B734 347 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 SLC16A5O15375 505 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 ZBTB43O43298 467 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 KDM4BO94953 1096 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 CLDN14O95500 239 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 DAOP14920 347 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 AKR1B1P15121 316 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 KRT20P35900 424 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 SEC61A1P61619 476 aaKnown RBP6.04□□□□□ -1.44
NPAS3-204ENST00000546849 TMF1P82094 1093 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 FHL1Q13642 323 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 DECR1Q16698 335 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 C15orf59Q2T9L4 293 aaPredicted RBP6.04□□□□□ -1.44
NPAS3-204ENST00000546849 TSPAN33Q86UF1 283 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 GLCCI1Q86VQ1 547 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 SPATA2LQ8IUW3 424 aaPredicted RBP6.04□□□□□ -1.44
NPAS3-204ENST00000546849 MCEMP1Q8IX19 187 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 EMC1Q8N766 993 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 HMGCLL1Q8TB92 370 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 PRPF31Q8WWY3 499 aaKnown RBP6.04□□□□□ -1.44
NPAS3-204ENST00000546849 SMC6Q96SB8 1091 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 DDOQ99489 341 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 RAD21L1Q9H4I0 556 aa6.04□□□□□ -1.44
NPAS3-204ENST00000546849 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.04□□□□□ -1.44
NPAS3-204ENST00000546849 KCNN4O15554 427 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 AVILO75366 819 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 PAPSS2O95340 614 aaPredicted RBP6.03□□□□□ -1.44
NPAS3-204ENST00000546849 GH2P01242 217 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 VPREB1P12018 145 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 MMP9P14780 707 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 GJA1P17302 382 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 ACADLP28330 430 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 AMPHP49418 695 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 TUBA1BP68363 451 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 TRAF3Q13114 568 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 PRPF4BQ13523 1007 aaKnown RBP6.03□□□□□ -1.44
NPAS3-204ENST00000546849 ZDHHC20Q5W0Z9 365 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 TMEM198Q66K66 360 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 ZNF280DQ6N043 979 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 PAPD4Q6PIY7 484 aaKnown RBP6.03□□□□□ -1.44
NPAS3-204ENST00000546849 CLEC17AQ6ZS10 378 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 SFR1Q86XK3 245 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 DNAAF5Q86Y56 855 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 CEP295NLQ96MC4 621 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 CAMK1GQ96NX5 476 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 ZNF385AQ96PM9 386 aaKnown RBP6.03□□□□□ -1.44
NPAS3-204ENST00000546849 PAFAH2Q99487 392 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 SLF1Q9BQI6 1058 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 RTN4RQ9BZR6 473 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 HIPK2Q9H2X6 1198 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 PCDH9Q9HC56 1237 aa6.03□□□□□ -1.44
NPAS3-204ENST00000546849 CHMP1AQ9HD42 196 aaPredicted RBP6.03□□□□□ -1.44
NPAS3-204ENST00000546849 PDE7BQ9NP56 450 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms