RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 TUBB2BQ9BVA1 445 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 GPR174Q9BXC1 333 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 ADGRE3Q9BY15 652 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 PCED1AQ9H1Q7 454 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 KCNH6Q9H252 994 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 EPC1Q9H2F5 836 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 C6orf106Q9H6K1 298 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-211ENST00000546304 LRRC40Q9H9A6 602 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 EIF2B3Q9NR50 452 aaKnown RBP6.34□□□□□ -1.39
PRKDC-211ENST00000546304 WSB2Q9NYS7 404 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-211ENST00000546304 B4GALT6Q9UBX8 382 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 VTI1BQ9UEU0 232 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 ASIC3Q9UHC3 531 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 FEZ2Q9UHY8 353 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-211ENST00000546304 PHTF1Q9UMS5 762 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-211ENST00000546304 NEU2Q9Y3R4 380 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 FADS3Q9Y5Q0 445 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 LRP4O75096 1905 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 TMEM131Q92545 1883 aa6.34□□□□□ -1.39
PRKDC-211ENST00000546304 PCDH15Q96QU1 1955 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 PLXNB3Q9ULL4 1909 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 C1orf232A0A0U1RR37 186 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 LOC285095A0A1B0GVY8 99 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 A0A1W2PQU0 124 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 C10orf142B7Z368 130 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 TTI1O43156 1089 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 PAX4O43316 350 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 LATO43561 262 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 TSPAN6O43657 245 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 USP12O75317 370 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 TMEM63AO94886 807 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 SLITRK5O94991 958 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 PCDH8O95206 1070 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 EPOP01588 193 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 KRT14P02533 472 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 IGHV4-34P06331 123 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 ELFN1P0C7U0 828 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 PIRTP0C851 137 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 CYP2A6P11509 494 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-211ENST00000546304 C6P13671 934 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 CTPS1P17812 591 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 TPSB2P20231 275 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 VIPR1P32241 457 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 ADRA1AP35348 466 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 LMAN1P49257 510 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 FAM193AP78312 1265 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 SEMG2Q02383 582 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 OLIG2Q13516 323 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 SIM2Q14190 667 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-211ENST00000546304 KCNJ11Q14654 390 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 TPSAB1Q15661 275 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 SLC1A5Q15758 541 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 CNGA3Q16281 694 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 NKG7Q16617 165 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 PLK5Q496M5 336 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 SIRPB2Q5JXA9 342 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 SYCP2LQ5T4T6 812 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 LYSMD4Q5XG99 296 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 SEL1L3Q68CR1 1132 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 LRRC66Q68CR7 880 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 KIAA0895LQ68EN5 471 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 KCTD11Q693B1 232 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 NAPEPLDQ6IQ20 393 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 CCDC70Q6NSX1 233 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 C8orf74Q6P047 294 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 ZNF574Q6ZN55 896 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-211ENST00000546304 PRR23BQ6ZRT6 265 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 C22orf34Q6ZV56 151 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 SYDE1Q6ZW31 735 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-211ENST00000546304 LPCAT2Q7L5N7 544 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 KDELC2Q7Z4H8 507 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 TTC7BQ86TV6 843 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 TSPAN33Q86UF1 283 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 HORMAD1Q86X24 394 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 NDUFAF2Q8N183 169 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 SLC25A41Q8N5S1 370 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 MNS1Q8NEH6 495 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 CADM4Q8NFZ8 388 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 CXorf40AQ8TE69 158 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 RMDN1Q96DB5 314 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 HRASLS5Q96KN8 279 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 SMIM14Q96QK8 99 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 LYSMD1Q96S90 227 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 APOL2Q9BQE5 337 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 TRIM51Q9BSJ1 452 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 WRAP53Q9BUR4 548 aaKnown RBP6.33□□□□□ -1.4
PRKDC-211ENST00000546304 RSRP1Q9BUV0 290 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 IRF2BPLQ9H1B7 796 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 TPX2Q9ULW0 747 aaKnown RBP6.33□□□□□ -1.4
PRKDC-211ENST00000546304 SMG5Q9UPR3 1016 aaKnown RBP6.33□□□□□ -1.4
PRKDC-211ENST00000546304 ZNF711Q9Y462 761 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 ZFC3H1O60293 1989 aaKnown RBP6.33□□□□□ -1.4
PRKDC-211ENST00000546304 ADAMTS9Q9P2N4 1935 aa6.33□□□□□ -1.4
PRKDC-211ENST00000546304 PTPRZ1P23471 2315 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-211ENST00000546304 PIKFYVEQ9Y2I7 2098 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 ATXN2Q99700 1313 aaKnown RBP6.32□□□□□ -1.4
PRKDC-211ENST00000546304 GOLGA4Q13439 2230 aaKnown RBP6.32□□□□□ -1.4
PRKDC-211ENST00000546304 TBC1D3DA0A087WVF3 549 aa6.32□□□□□ -1.4
PRKDC-211ENST00000546304 TBC1D3IA0A087WXS9 549 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms