RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 HDAC11Q96DB2 347 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 SLC38A3Q99624 504 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 HERPUD2Q9BSE4 406 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 NUP85Q9BW27 656 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 TBC1D10AQ9BXI6 508 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 PCDH9Q9HC56 1237 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 DNPEPQ9ULA0 475 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 UNC79Q9P2D8 2635 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 GOLGA6L3A6NEY3 463 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 CHUKO15111 745 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 CAPN5O15484 640 aaPredicted RBP12.41□□□□□ -0.42
COPS7A-221ENST00000546229 ACP5P13686 325 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 CCNCP24863 283 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 MAP4P27816 1152 aaKnown RBP12.41□□□□□ -0.42
COPS7A-221ENST00000546229 ZNF165P49910 485 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 NFATC2Q13469 925 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 IFI16Q16666 785 aaKnown RBP12.41□□□□□ -0.42
COPS7A-221ENST00000546229 KHDC1Q4VXA5 237 aaKnown RBP12.41□□□□□ -0.42
COPS7A-221ENST00000546229 ANKRD20A8PQ5CZ79 823 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 CHST15Q7LFX5 561 aaPredicted RBP12.41□□□□□ -0.42
COPS7A-221ENST00000546229 LYSMD3Q7Z3D4 306 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 ZNF547Q8IVP9 402 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 LPCAT1Q8NF37 534 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 NSMCE1Q8WV22 266 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 STARD8Q92502 1023 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 SYN2Q92777 582 aaPredicted RBP12.41□□□□□ -0.42
COPS7A-221ENST00000546229 CATSPER2Q96P56 530 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 PLEKHG4BQ96PX9 1271 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 CARD9Q9H257 536 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 RMI1Q9H9A7 625 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 UCK1Q9HA47 277 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 RBM22Q9NW64 420 aaKnown RBP eCLIP12.41□□□□□ -0.42
COPS7A-221ENST00000546229 ATXN10Q9UBB4 475 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 CPNE7Q9UBL6 633 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 SLC23A2Q9UGH3 650 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 IP6K2Q9UHH9 426 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 TMPRSS11EQ9UL52 423 aa12.41□□□□□ -0.42
COPS7A-221ENST00000546229 MRPS18BQ9Y676 258 aaKnown RBP12.41□□□□□ -0.42
COPS7A-221ENST00000546229 KIR2DS5A0A0G2JLQ3 304 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 A0A0G2JNG1 304 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 C1orf232A0A0U1RR37 186 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 RGSL1A5PLK6 1076 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 A8MU76 341 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 ANKRD66B4E2M5 251 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 K7EM74 188 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 KIR2DS3K7RE56 304 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 FURINP09958 794 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 BRAFP15056 766 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 ZNF8P17098 575 aaPredicted RBP12.4□□□□□ -0.42
COPS7A-221ENST00000546229 CES1P23141 567 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 CCR10P46092 362 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 DCDC1P59894 354 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 IFI35P80217 286 aaPredicted RBP12.4□□□□□ -0.42
COPS7A-221ENST00000546229 KRT81Q14533 505 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 KIR2DS5Q14953 304 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 SNAP47Q5SQN1 464 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 ZNF648Q5T619 568 aaPredicted RBP12.4□□□□□ -0.42
COPS7A-221ENST00000546229 TIGD7Q6NT04 549 aaPredicted RBP12.4□□□□□ -0.42
COPS7A-221ENST00000546229 CEACAM20Q6UY09 585 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 C11orf96Q7Z7L8 435 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.4□□□□□ -0.42
COPS7A-221ENST00000546229 PLD5Q8N7P1 536 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 GPR26Q8NDV2 337 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 ZPBPQ9BS86 351 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 EPB41L1Q9H4G0 881 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 GPN2Q9H9Y4 310 aaPredicted RBP12.4□□□□□ -0.42
COPS7A-221ENST00000546229 PRDM8Q9NQV8 689 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 ZNF624Q9P2J8 865 aaPredicted RBP12.4□□□□□ -0.42
COPS7A-221ENST00000546229 ZNHIT2Q9UHR6 403 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 SLC30A1Q9Y6M5 507 aa12.4□□□□□ -0.42
COPS7A-221ENST00000546229 C3orf70A6NLC5 250 aaPredicted RBP12.39□□□□□ -0.43
COPS7A-221ENST00000546229 GRID2O43424 1007 aa12.39□□□□□ -0.43
COPS7A-221ENST00000546229 PROSCO94903 275 aa12.39□□□□□ -0.43
COPS7A-221ENST00000546229 ASMTLO95671 621 aa12.39□□□□□ -0.43
COPS7A-221ENST00000546229 PRKAR1AP10644 381 aa12.39□□□□□ -0.43
COPS7A-221ENST00000546229 CD86P42081 329 aa12.39□□□□□ -0.43
COPS7A-221ENST00000546229 PPIDQ08752 370 aaKnown RBP12.39□□□□□ -0.43
COPS7A-221ENST00000546229 BIRC2Q13490 618 aa12.39□□□□□ -0.43
COPS7A-221ENST00000546229 LAMB3Q13751 1172 aa12.39□□□□□ -0.43
COPS7A-221ENST00000546229 IGFBP7Q16270 282 aa12.39□□□□□ -0.43
COPS7A-221ENST00000546229 TDRD12Q587J7 1177 aaKnown RBP12.39□□□□□ -0.43
COPS7A-221ENST00000546229 ADGRG6Q86SQ4 1221 aa12.39□□□□□ -0.43
COPS7A-221ENST00000546229 C9orf43Q8TAL5 461 aaPredicted RBP12.39□□□□□ -0.43
COPS7A-221ENST00000546229 NCSTNQ92542 709 aa12.39□□□□□ -0.43
COPS7A-221ENST00000546229 C9orf72Q96LT7 481 aa12.39□□□□□ -0.43
COPS7A-221ENST00000546229 OLFM3Q96PB7 478 aa12.39□□□□□ -0.43
COPS7A-221ENST00000546229 FAM83DQ9H4H8 585 aa12.39□□□□□ -0.43
COPS7A-221ENST00000546229 ARFGAP3Q9NP61 516 aa12.39□□□□□ -0.43
COPS7A-221ENST00000546229 SEMA5BQ9P283 1151 aa12.39□□□□□ -0.43
COPS7A-221ENST00000546229 ANKMY1Q9P2S6 941 aa12.39□□□□□ -0.43
COPS7A-221ENST00000546229 ANAPC2Q9UJX6 822 aa12.39□□□□□ -0.43
COPS7A-221ENST00000546229 KCNK1O00180 336 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 MBD3O95983 291 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 GYPCP04921 128 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 SERPING1P05155 500 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 XRCC1P18887 633 aaPredicted RBP12.38□□□□□ -0.43
COPS7A-221ENST00000546229 SLC19A1P41440 591 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 LEPRP48357 1165 aaKnown RBP12.38□□□□□ -0.43
COPS7A-221ENST00000546229 CD97P48960 835 aa12.38□□□□□ -0.43
COPS7A-221ENST00000546229 EPHB1P54762 984 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms