RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 A0A1W2PPC4 97 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 METTL12A8MUP2 240 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 PRMT5O14744 637 aaPredicted RBP15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 FAM155BO75949 473 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 IGHV4-34P06331 123 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 CD27P26842 260 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 LIMK2P53671 638 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 PPP2CBP62714 309 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 PPP2CAP67775 309 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 SEMG2Q02383 582 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 PTPRCAPQ14761 206 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 WSCD2Q2TBF2 565 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 PSAPL1Q6NUJ1 521 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 KYAT3Q6YP21 454 aaKnown RBP15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 STRA8Q7Z7C7 330 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 IQCHQ86VS3 1027 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 SERPINA9Q86WD7 417 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 DCP2Q8IU60 420 aaKnown RBP15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 GAB3Q8WWW8 586 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 SCAMP4Q969E2 229 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 PGM2Q96G03 612 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 COX14Q96I36 57 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 ZIM3Q96PE6 472 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 KLF6Q99612 283 aaPredicted RBP15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 PRRX2Q99811 253 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 TSSK1BQ9BXA7 367 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 GPR174Q9BXC1 333 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 C1QTNF1Q9BXJ1 281 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 CCDC68Q9H2F9 335 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 WDR26Q9H7D7 661 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 RMI1Q9H9A7 625 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 SMYD2Q9NRG4 433 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 EURLQ9NYK6 297 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 SENP1Q9P0U3 644 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 THADAQ6YHU6 1953 aa15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 TNRC6BQ9UPQ9 1833 aaKnown RBP15.88■□□□□ 0.13
PRPF40A-212ENST00000545856 OPA1O60313 960 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 MAGEC1O60732 1142 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 S1PR4O95977 384 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 PAK4O96013 591 aaPredicted RBP15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 SOD1P00441 154 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 MYCLP1P12525 358 aaPredicted RBP15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 KIAA1024LP59773 190 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 GPS2Q13227 327 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 IRF4Q15306 451 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 WDR45BQ5MNZ6 344 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 TAS2R42Q7RTR8 314 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 UNC5BQ8IZJ1 945 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 TMEM145Q8NBT3 493 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 LPGAT1Q92604 370 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 TSPAN17Q96FV3 270 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 DCUN1D1Q96GG9 259 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 HIC2Q96JB3 615 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 POPDC3Q9HBV1 291 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 KLHL42Q9P2K6 505 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 CD84Q9UIB8 345 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 GNPTGQ9UJJ9 305 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 COQ6Q9Y2Z9 468 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 PCDHGA2Q9Y5H1 932 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 CACNA1EQ15878 2313 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 A0A0U1RQS6 177 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 FAM47DPA6NHR8 397 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 FADS2P1A8MWK0 482 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 CACNB4O00305 520 aaPredicted RBP15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 CCL22O00626 93 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 SLC25A14O95258 325 aaPredicted RBP15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 SNRPAP09012 282 aaKnown RBP15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 MYZAPP0CAP1 466 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 RABIFP47224 123 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 RPL6Q02878 288 aaKnown RBP15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 ZNF844Q08AG5 666 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 FGL2Q14314 439 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 DBN1Q16643 649 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 GPRC6AQ5T6X5 926 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 LPCAT2Q7L5N7 544 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 ABI3BPQ7Z7G0 1075 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 LCA5Q86VQ0 697 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 ZC3HC1Q86WB0 502 aaKnown RBP15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 DENND6AQ8IWF6 608 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 PIANPQ8IYJ0 282 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 MAML2Q8IZL2 1156 aaPredicted RBP15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 GOLGA6L1Q8N7Z2 621 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 DCAKDQ8WVC6 231 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 DNASE2BQ8WZ79 361 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 KCNJ9Q92806 393 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 ISL2Q96A47 359 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 BIRC7Q96CA5 298 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 VPS39Q96JC1 886 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 PANX3Q96QZ0 392 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 AGAP2Q99490 1192 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 GPR22Q99680 433 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 CLPBQ9H078 707 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 C6orf106Q9H6K1 298 aaPredicted RBP15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 TRIM39Q9HCM9 518 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 CD93Q9NPY3 652 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 ZSCAN32Q9NX65 697 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 MARCH4Q9P2E8 410 aaPredicted RBP15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 GPR34Q9UPC5 381 aa15.87■□□□□ 0.13
PRPF40A-212ENST00000545856 OR51F1A6NGY5 319 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms