RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 TIMMDC1Q9NPL8 285 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 RHBDL2Q9NX52 303 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 FNIP2Q9P278 1114 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 GPR39O43194 453 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 KERAO60938 352 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 FGF1P05230 155 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 IDO1P14902 403 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 HLA-DPA1P20036 260 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 CTGFP29279 349 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 IL12AP29459 219 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 PLCL1Q15111 1095 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 PYCR3Q53H96 274 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 INTS11Q5TA45 600 aaKnown RBP15.69■□□□□ 0.1
LDLR-204ENST00000545707 RALGPS2Q86X27 583 aaPredicted RBP15.69■□□□□ 0.1
LDLR-204ENST00000545707 C2orf69Q8N8R5 385 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 MFSD2AQ8NA29 543 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 TRPV3Q8NET8 790 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 GPR150Q8NGU9 434 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 HM13Q8TCT9 377 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 FUBP1Q96AE4 644 aaKnown RBP15.69■□□□□ 0.1
LDLR-204ENST00000545707 FEM1CQ96JP0 617 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 ASB2Q96Q27 587 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 KCTD14Q9BQ13 255 aaPredicted RBP15.69■□□□□ 0.1
LDLR-204ENST00000545707 SPON2Q9BUD6 331 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 TRIM15Q9C019 465 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 BPIFA1Q9NP55 256 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 A0A1W2PP18 115 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 CLOCKO15516 846 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 PRAMEF11O60813 436 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 NIPSNAP2O75323 286 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 BMP10O95393 424 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 MYF6P23409 242 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 SCNN1BP51168 640 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 KCNK10P57789 538 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 BNIP2Q12982 314 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 TRIM32Q13049 653 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 DCTN2Q13561 401 aaKnown RBP15.69■□□□□ 0.1
LDLR-204ENST00000545707 ATP6AP1Q15904 470 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 RBBP7Q16576 425 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 PTPRNQ16849 979 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 SLC36A3Q495N2 470 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 PRMT9Q6P2P2 845 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 TBPL2Q6SJ96 375 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 GPR141Q7Z602 305 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 PIANPQ8IYJ0 282 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 SIDT2Q8NBJ9 832 aaKnown RBP15.69■□□□□ 0.1
LDLR-204ENST00000545707 MDGA1Q8NFP4 955 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 HSPBAP1Q96EW2 488 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 FBXO44Q9H4M3 255 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 TRMT13Q9NUP7 481 aaKnown RBP15.69■□□□□ 0.1
LDLR-204ENST00000545707 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.69■□□□□ 0.1
LDLR-204ENST00000545707 TAS2R13Q9NYV9 303 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 MYO16Q9Y6X6 1858 aa15.69■□□□□ 0.1
LDLR-204ENST00000545707 TSPAN3O60637 253 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 SNAP29O95721 258 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 SERPINF2P08697 491 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 ADARP55265 1226 aaKnown RBP15.68■□□□□ 0.1
LDLR-204ENST00000545707 TUBA4AP68366 448 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 IRF5Q13568 498 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 RTN4RL1Q86UN2 441 aaPredicted RBP15.68■□□□□ 0.1
LDLR-204ENST00000545707 EGFL6Q8IUX8 553 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 LGI2Q8N0V4 545 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 ABTB1Q969K4 478 aaPredicted RBP15.68■□□□□ 0.1
LDLR-204ENST00000545707 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.68■□□□□ 0.12e-6■■■■□ 26.2
LDLR-204ENST00000545707 ISOC1Q96CN7 298 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 HGH1Q9BTY7 390 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 CCDC68Q9H2F9 335 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 CRISPLD1Q9H336 500 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 SARS2Q9NP81 518 aaKnown RBP15.68■□□□□ 0.1
LDLR-204ENST00000545707 IRAK4Q9NWZ3 460 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 EVLQ9UI08 416 aaPredicted RBP15.68■□□□□ 0.1
LDLR-204ENST00000545707 A0A087WXM4 84 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 DRGXA6NNA5 263 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 PFDN1O60925 122 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 NDUFS3O75489 264 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 C1RP00736 705 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 VARSP26640 1264 aaKnown RBP15.68■□□□□ 0.1
LDLR-204ENST00000545707 ARL1P40616 181 aaPredicted RBP15.68■□□□□ 0.1
LDLR-204ENST00000545707 HK3P52790 923 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 TMED1Q13445 227 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 TRIP4Q15650 581 aaPredicted RBP15.68■□□□□ 0.1
LDLR-204ENST00000545707 C18orf21Q32NC0 220 aaPredicted RBP15.68■□□□□ 0.1
LDLR-204ENST00000545707 PSAPL1Q6NUJ1 521 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 SLC2A7Q6PXP3 512 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 CDYL2Q8N8U2 506 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 EEF1AKMT1Q8WVE0 214 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 FATE1Q969F0 183 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 C12orf43Q96C57 262 aaKnown RBP15.68■□□□□ 0.1
LDLR-204ENST00000545707 VPS50Q96JG6 964 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 ZNF599Q96NL3 588 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 C9orf16Q9BUW7 83 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 DERL2Q9GZP9 239 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 RPF2Q9H7B2 306 aaKnown RBP15.68■□□□□ 0.1
LDLR-204ENST00000545707 AIG1Q9NVV5 245 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 EIF2B4Q9UI10 523 aaKnown RBP15.68■□□□□ 0.1
LDLR-204ENST00000545707 FADS3Q9Y5Q0 445 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 SQORQ9Y6N5 450 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 DOCK4Q8N1I0 1966 aa15.68■□□□□ 0.1
LDLR-204ENST00000545707 TDRD15B5MCY1 1934 aaKnown RBP15.67■□□□□ 0.1
LDLR-204ENST00000545707 TRPM7Q96QT4 1865 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms