RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 POLR2LP62875 67 aaKnown RBP15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 UBE2IP63279 158 aaKnown RBP15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 PDE1BQ01064 536 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 BCL2L1Q07817 233 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 CETN1Q12798 172 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 IZUMO3Q5VZ72 239 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 PRSS42Q7Z5A4 293 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 ZDHHC17Q8IUH5 632 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 RSC1A1Q92681 617 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 SGSM3Q96HU1 749 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 PLEKHG4BQ96PX9 1271 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 TRAPPC9Q96Q05 1148 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 AGAP2Q99490 1192 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 MDFIQ99750 246 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 TSG101Q99816 390 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 REPIN1Q9BWE0 567 aaKnown RBP15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 RETREG1Q9H6L5 497 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 ZNF552Q9H707 407 aaPredicted RBP15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 PDFQ9HBH1 243 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 SCHIP1Q9P0W5 487 aaPredicted RBP15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 TMEM63CQ9P1W3 806 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 TCFL5Q9UL49 500 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 PIKFYVEQ9Y2I7 2098 aa15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 IGHV5-51A0A0C4DH38 117 aa15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 FAM155BO75949 473 aa15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 MBD3O95983 291 aa15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 ATP1A1P05023 1023 aaKnown RBP15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 EBLN1P0CF75 366 aa15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 ACP5P13686 325 aa15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 F3P13726 295 aa15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 ART1P52961 327 aa15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 RRADP55042 308 aa15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 MARSP56192 900 aaKnown RBP15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 C15orf59Q2T9L4 293 aaPredicted RBP15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 PRAMEF17Q5VTA0 474 aa15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 TSPAN33Q86UF1 283 aa15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 FMR1NBQ8N0W7 255 aaPredicted RBP15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 PYROXD2Q8N2H3 581 aa15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 ZADH2Q8N4Q0 377 aa15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 CCDC185Q8N715 623 aa15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 EMC1Q8N766 993 aa15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 FAR1Q8WVX9 515 aa15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 CCDC120Q96HB5 630 aa15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 TMEM59LQ9UK28 342 aa15.16■□□□□ 0.02
CLSTN3-216ENST00000545663 KIR2DS5A0A0G2JLQ3 304 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 A0A0G2JNG1 304 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 KIR2DS3K7RE56 304 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 P4HA2O15460 535 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 KCNN4O15554 427 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 DNAJC6O75061 913 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 ASMTLO95671 621 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 TEAD1P28347 426 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 VIPR1P32241 457 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 SNX16P57768 344 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 KCNK10P57789 538 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 MYBPC3Q14896 1274 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 KIR2DS5Q14953 304 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 HIF1AQ16665 826 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 CDO1Q16878 200 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 IRGCQ6NXR0 463 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 ADAMTSL4Q6UY14 1074 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 SPOCD1Q6ZMY3 1216 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 KRBA2Q6ZNG9 492 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 TMEM26Q6ZUK4 368 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 RTL3Q8N8U3 475 aaKnown RBP15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 SIDT2Q8NBJ9 832 aaKnown RBP15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 SCAMP4Q969E2 229 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 HERPUD2Q9BSE4 406 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 ABCG8Q9H221 673 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 WASH6PQ9NQA3 447 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 FGF21Q9NSA1 209 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 FER1L5A0AVI2 2057 aa15.15■□□□□ 0.02
CLSTN3-216ENST00000545663 SCRG1O75711 98 aa15.14■□□□□ 0.01
CLSTN3-216ENST00000545663 CAPN1P07384 714 aa15.14■□□□□ 0.01
CLSTN3-216ENST00000545663 KRT9P35527 623 aa15.14■□□□□ 0.01
CLSTN3-216ENST00000545663 KIR3DL1P43629 444 aa15.14■□□□□ 0.01
CLSTN3-216ENST00000545663 CSNK1DP48730 415 aa15.14■□□□□ 0.01
CLSTN3-216ENST00000545663 CCDC40Q4G0X9 1142 aa15.14■□□□□ 0.01
CLSTN3-216ENST00000545663 TECPR1Q7Z6L1 1165 aa15.14■□□□□ 0.01
CLSTN3-216ENST00000545663 GALNT16Q8N428 558 aa15.14■□□□□ 0.01
CLSTN3-216ENST00000545663 HDAC11Q96DB2 347 aa15.14■□□□□ 0.01
CLSTN3-216ENST00000545663 C18orf8Q96DM3 657 aa15.14■□□□□ 0.01
CLSTN3-216ENST00000545663 FCRL4Q96PJ5 515 aa15.14■□□□□ 0.01
CLSTN3-216ENST00000545663 NOVA2Q9UNW9 492 aaKnown RBP15.14■□□□□ 0.01
CLSTN3-216ENST00000545663 JMJD1CQ15652 2540 aa15.13■□□□□ 0.01
CLSTN3-216ENST00000545663 NPIPB15A6NHN6 443 aaPredicted RBP15.13■□□□□ 0.01
CLSTN3-216ENST00000545663 BHMG1C9JSJ3 638 aaPredicted RBP15.13■□□□□ 0.01
CLSTN3-216ENST00000545663 PRAMEF11O60813 436 aa15.13■□□□□ 0.01
CLSTN3-216ENST00000545663 CPNE3O75131 537 aaKnown RBP15.13■□□□□ 0.01
CLSTN3-216ENST00000545663 SMC2O95347 1197 aa15.13■□□□□ 0.01
CLSTN3-216ENST00000545663 ALPPP05187 535 aa15.13■□□□□ 0.01
CLSTN3-216ENST00000545663 EPHB2P29323 1055 aa15.13■□□□□ 0.01
CLSTN3-216ENST00000545663 GABRB2P47870 512 aa15.13■□□□□ 0.01
CLSTN3-216ENST00000545663 SCNN1BP51168 640 aa15.13■□□□□ 0.01
CLSTN3-216ENST00000545663 YBEYP58557 167 aaPredicted RBP15.13■□□□□ 0.01
CLSTN3-216ENST00000545663 TLE4Q04727 773 aa15.13■□□□□ 0.01
CLSTN3-216ENST00000545663 DPTQ07507 201 aa15.13■□□□□ 0.01
CLSTN3-216ENST00000545663 PAK1Q13153 545 aa15.13■□□□□ 0.01
CLSTN3-216ENST00000545663 PARP15Q460N3 678 aa15.13■□□□□ 0.01
CLSTN3-216ENST00000545663 PLEKHS1Q5SXH7 462 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms