RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 LIMK2P53671 638 aa20.91■□□□□ 0.94
SCARB1-210ENST00000545493 WASHC5Q12768 1159 aa20.91■□□□□ 0.94
SCARB1-210ENST00000545493 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.91■□□□□ 0.94
SCARB1-210ENST00000545493 ZNF648Q5T619 568 aaPredicted RBP20.91■□□□□ 0.94
SCARB1-210ENST00000545493 KAZNQ674X7 775 aa20.91■□□□□ 0.94
SCARB1-210ENST00000545493 TMC3Q7Z5M5 1100 aa20.91■□□□□ 0.94
SCARB1-210ENST00000545493 TEKT5Q96M29 485 aa20.91■□□□□ 0.94
SCARB1-210ENST00000545493 CARD9Q9H257 536 aa20.91■□□□□ 0.94
SCARB1-210ENST00000545493 MAGEE1Q9HCI5 957 aa20.91■□□□□ 0.94
SCARB1-210ENST00000545493 ATXN10Q9UBB4 475 aa20.91■□□□□ 0.94
SCARB1-210ENST00000545493 ZNHIT2Q9UHR6 403 aa20.91■□□□□ 0.94
SCARB1-210ENST00000545493 ALG6Q9Y672 507 aa20.91■□□□□ 0.94
SCARB1-210ENST00000545493 hCG_1818297A0A087WSY0 165 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 HGSO14964 777 aaPredicted RBP20.9■□□□□ 0.94
SCARB1-210ENST00000545493 AURKAO14965 403 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 EFSO43281 561 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 NUAK1O60285 661 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 CCL4P13236 92 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 NFKB1P19838 968 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 NR2C2P49116 596 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 TFDP2Q14188 446 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 NOMO1Q15155 1222 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 KIAA1614Q5VZ46 1190 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 CCDC81Q6ZN84 652 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 KATNAL2Q8IYT4 538 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 TRAM1L1Q8N609 369 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 TFB1MQ8WVM0 346 aaKnown RBP20.9■□□□□ 0.94
SCARB1-210ENST00000545493 USP7Q93009 1102 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 HAUS1Q96CS2 278 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 CCNL2Q96S94 520 aaPredicted RBP20.9■□□□□ 0.94
SCARB1-210ENST00000545493 ANP32EQ9BTT0 268 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 ZSCAN5AQ9BUG6 496 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 SPATA16Q9BXB7 569 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 TRIM5Q9C035 493 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 RMI1Q9H9A7 625 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 KCNK4Q9NYG8 393 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 UBP1Q9NZI7 540 aa20.9■□□□□ 0.94
SCARB1-210ENST00000545493 SDK2Q58EX2 2172 aa20.89■□□□□ 0.94
SCARB1-210ENST00000545493 TRBV23OR9-2A0A075B6M9 112 aa20.89■□□□□ 0.93
SCARB1-210ENST00000545493 ZW10O43264 779 aa20.89■□□□□ 0.93
SCARB1-210ENST00000545493 PMPCBO75439 489 aa20.89■□□□□ 0.93
SCARB1-210ENST00000545493 NDST3O95803 873 aa20.89■□□□□ 0.93
SCARB1-210ENST00000545493 ZNF8P17098 575 aaPredicted RBP20.89■□□□□ 0.93
SCARB1-210ENST00000545493 BPIP17213 487 aa20.89■□□□□ 0.93
SCARB1-210ENST00000545493 MPSTP25325 297 aa20.89■□□□□ 0.93
SCARB1-210ENST00000545493 ARSDP51689 593 aa20.89■□□□□ 0.93
SCARB1-210ENST00000545493 GPLD1P80108 840 aa20.89■□□□□ 0.93
SCARB1-210ENST00000545493 SQSTM1Q13501 440 aa20.89■□□□□ 0.93
SCARB1-210ENST00000545493 C11orf63Q6NUN7 778 aa20.89■□□□□ 0.93
SCARB1-210ENST00000545493 KDELC1Q6UW63 502 aa20.89■□□□□ 0.93
SCARB1-210ENST00000545493 ZFAND4Q86XD8 727 aa20.89■□□□□ 0.93
SCARB1-210ENST00000545493 OR4D9Q8NGE8 314 aa20.89■□□□□ 0.93
SCARB1-210ENST00000545493 KRT35Q92764 455 aa20.89■□□□□ 0.93
SCARB1-210ENST00000545493 OR2AG1Q9H205 316 aa20.89■□□□□ 0.93
SCARB1-210ENST00000545493 F5H423 210 aaPredicted RBP20.88■□□□□ 0.93
SCARB1-210ENST00000545493 GRID2O43424 1007 aa20.88■□□□□ 0.93
SCARB1-210ENST00000545493 HHEXQ03014 270 aa20.88■□□□□ 0.93
SCARB1-210ENST00000545493 TRA2AQ13595 282 aaKnown RBP eCLIP20.88■□□□□ 0.93
SCARB1-210ENST00000545493 PLA2G4EQ3MJ16 856 aa20.88■□□□□ 0.93
SCARB1-210ENST00000545493 TAF1BQ53T94 588 aaPredicted RBP20.88■□□□□ 0.93
SCARB1-210ENST00000545493 PDPK2PQ6A1A2 396 aa20.88■□□□□ 0.93
SCARB1-210ENST00000545493 ADGRG6Q86SQ4 1221 aa20.88■□□□□ 0.93
SCARB1-210ENST00000545493 ZNF843Q8N446 348 aa20.88■□□□□ 0.93
SCARB1-210ENST00000545493 GLYATL1Q969I3 302 aa20.88■□□□□ 0.93
SCARB1-210ENST00000545493 QKIQ96PU8 341 aaKnown RBP eCLIP20.88■□□□□ 0.93
SCARB1-210ENST00000545493 SLC38A3Q99624 504 aa20.88■□□□□ 0.93
SCARB1-210ENST00000545493 HERPUD2Q9BSE4 406 aa20.88■□□□□ 0.93
SCARB1-210ENST00000545493 GPR63Q9BZJ6 419 aa20.88■□□□□ 0.93
SCARB1-210ENST00000545493 SEMA4CQ9C0C4 833 aa20.88■□□□□ 0.93
SCARB1-210ENST00000545493 SARS2Q9NP81 518 aaKnown RBP20.88■□□□□ 0.93
SCARB1-210ENST00000545493 WDR70Q9NW82 654 aa20.88■□□□□ 0.93
SCARB1-210ENST00000545493 PCDHA13Q9Y5I0 950 aa20.88■□□□□ 0.93
SCARB1-210ENST00000545493 ZNF106Q9H2Y7 1883 aaKnown RBP20.88■□□□□ 0.93
SCARB1-210ENST00000545493 BOD1L1Q8NFC6 3051 aa20.87■□□□□ 0.93
SCARB1-210ENST00000545493 F3P13726 295 aa20.87■□□□□ 0.93
SCARB1-210ENST00000545493 KHDC1Q4VXA5 237 aaKnown RBP20.87■□□□□ 0.93
SCARB1-210ENST00000545493 TFDP3Q5H9I0 405 aa20.87■□□□□ 0.93
SCARB1-210ENST00000545493 IYDQ6PHW0 289 aa20.87■□□□□ 0.93
SCARB1-210ENST00000545493 CRTC3Q6UUV7 619 aa20.87■□□□□ 0.93
SCARB1-210ENST00000545493 BZW1Q7L1Q6 419 aaKnown RBP20.87■□□□□ 0.93
SCARB1-210ENST00000545493 ZC3H18Q86VM9 953 aaKnown RBP20.87■□□□□ 0.93
SCARB1-210ENST00000545493 DTX1Q86Y01 620 aa20.87■□□□□ 0.93
SCARB1-210ENST00000545493 PHYKPLQ8IUZ5 450 aa20.87■□□□□ 0.93
SCARB1-210ENST00000545493 OXNAD1Q96HP4 312 aaPredicted RBP20.87■□□□□ 0.93
SCARB1-210ENST00000545493 ZMYND15Q9H091 742 aa20.87■□□□□ 0.93
SCARB1-210ENST00000545493 KLHL8Q9P2G9 620 aaPredicted RBP20.87■□□□□ 0.93
SCARB1-210ENST00000545493 FAM153AQ9UHL3 310 aa20.87■□□□□ 0.93
SCARB1-210ENST00000545493 TMPRSS11EQ9UL52 423 aa20.87■□□□□ 0.93
SCARB1-210ENST00000545493 LOC285095A0A1B0GVY8 99 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 CHUKO15111 745 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 DUX1O43812 170 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 SNX2O60749 519 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 MTX2O75431 263 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 SLC25A14O95258 325 aaPredicted RBP20.86■□□□□ 0.93
SCARB1-210ENST00000545493 FGF3P11487 239 aaPredicted RBP20.86■□□□□ 0.93
SCARB1-210ENST00000545493 CHRNA4P43681 627 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 WNT3AP56704 352 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 C19orf57Q0VDD7 668 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 NFATC2Q13469 925 aa20.86■□□□□ 0.93
SCARB1-210ENST00000545493 PPP2R5EQ16537 467 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms