RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 PGDP52209 483 aa14.54□□□□□ -0.08
RTN3-214ENST00000545432 TPD52L1Q16890 204 aaPredicted RBP14.54□□□□□ -0.08
RTN3-214ENST00000545432 ZNF517Q6ZMY9 492 aaPredicted RBP14.54□□□□□ -0.08
RTN3-214ENST00000545432 TMEM26Q6ZUK4 368 aa14.54□□□□□ -0.08
RTN3-214ENST00000545432 MCOLN2Q8IZK6 566 aa14.54□□□□□ -0.08
RTN3-214ENST00000545432 TEX26Q8N6G2 289 aa14.54□□□□□ -0.08
RTN3-214ENST00000545432 CT55Q8WUE5 264 aa14.54□□□□□ -0.08
RTN3-214ENST00000545432 STAMBPL1Q96FJ0 436 aa14.54□□□□□ -0.08
RTN3-214ENST00000545432 LYSMD1Q96S90 227 aa14.54□□□□□ -0.08
RTN3-214ENST00000545432 SLC25A23Q9BV35 468 aa14.54□□□□□ -0.08
RTN3-214ENST00000545432 RIOK2Q9BVS4 552 aaKnown RBP14.54□□□□□ -0.08
RTN3-214ENST00000545432 CWC15Q9P013 229 aaKnown RBP14.54□□□□□ -0.08
RTN3-214ENST00000545432 RCOR3Q9P2K3 495 aaPredicted RBP14.54□□□□□ -0.08
RTN3-214ENST00000545432 ERRFI1Q9UJM3 462 aaPredicted RBP14.54□□□□□ -0.08
RTN3-214ENST00000545432 SLC30A1Q9Y6M5 507 aa14.54□□□□□ -0.08
RTN3-214ENST00000545432 LRBAP50851 2863 aa14.54□□□□□ -0.08
RTN3-214ENST00000545432 GOLGA6CA6NDK9 693 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 GOLGA6BA6NDN3 693 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 NUAK1O60285 661 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 ATP1A1P05023 1023 aaKnown RBP14.53□□□□□ -0.08
RTN3-214ENST00000545432 GOLGA6DP0CG33 693 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 LPOP22079 712 aaPredicted RBP14.53□□□□□ -0.08
RTN3-214ENST00000545432 EEF1GP26641 437 aaKnown RBP14.53□□□□□ -0.08
RTN3-214ENST00000545432 TNFRSF8P28908 595 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 PTPN4P29074 926 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 SLC19A1P41440 591 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 POLR2FP61218 127 aaKnown RBP14.53□□□□□ -0.08
RTN3-214ENST00000545432 MRPL49Q13405 166 aaKnown RBP14.53□□□□□ -0.08
RTN3-214ENST00000545432 MAMLD1Q13495 774 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 ZNF235Q14590 738 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 IHHQ14623 411 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 TCP11X2Q5H9J9 407 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 HENMT1Q5T8I9 393 aaKnown RBP14.53□□□□□ -0.08
RTN3-214ENST00000545432 C1QL3Q5VWW1 255 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 ALG1LQ6GMV1 187 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 JMJD6Q6NYC1 403 aaPredicted RBP14.53□□□□□ -0.08
RTN3-214ENST00000545432 PPP1R3BQ86XI6 285 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 SMIM14Q96QK8 99 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 CARD9Q9H257 536 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 ACTL8Q9H568 366 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 AKIRIN1Q9H9L7 192 aaPredicted RBP14.53□□□□□ -0.08
RTN3-214ENST00000545432 CASS4Q9NQ75 786 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 SAMSN1Q9NSI8 373 aaKnown RBP14.53□□□□□ -0.08
RTN3-214ENST00000545432 GOLGA6AQ9NYA3 693 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 SCHIP1Q9P0W5 487 aaPredicted RBP14.53□□□□□ -0.08
RTN3-214ENST00000545432 DNPEPQ9ULA0 475 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 KCNK6Q9Y257 313 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 PRKAB1Q9Y478 270 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 C2CD3Q4AC94 2353 aa14.53□□□□□ -0.08
RTN3-214ENST00000545432 DAPK3O43293 454 aa14.52□□□□□ -0.09
RTN3-214ENST00000545432 UBXN7O94888 489 aa14.52□□□□□ -0.09
RTN3-214ENST00000545432 TIAF1O95411 115 aa14.52□□□□□ -0.09
RTN3-214ENST00000545432 CBX6O95503 412 aa14.52□□□□□ -0.09
RTN3-214ENST00000545432 ASMTLO95671 621 aa14.52□□□□□ -0.09
RTN3-214ENST00000545432 PRLP01236 227 aa14.52□□□□□ -0.09
RTN3-214ENST00000545432 CTPS1P17812 591 aa14.52□□□□□ -0.09
RTN3-214ENST00000545432 NELFEP18615 380 aaKnown RBP14.52□□□□□ -0.09
RTN3-214ENST00000545432 LEPRP48357 1165 aaKnown RBP14.52□□□□□ -0.09
RTN3-214ENST00000545432 KLK7P49862 253 aa14.52□□□□□ -0.09
RTN3-214ENST00000545432 PLEKHA7Q6IQ23 1121 aa14.52□□□□□ -0.09
RTN3-214ENST00000545432 ACAD10Q6JQN1 1059 aa14.52□□□□□ -0.09
RTN3-214ENST00000545432 SYVN1Q86TM6 617 aa14.52□□□□□ -0.09
RTN3-214ENST00000545432 BPHLQ86WA6 291 aaPredicted RBP14.52□□□□□ -0.09
RTN3-214ENST00000545432 RASGRP3Q8IV61 690 aa14.52□□□□□ -0.09
RTN3-214ENST00000545432 NDUFAF2Q8N183 169 aa14.52□□□□□ -0.09
RTN3-214ENST00000545432 ADAMTS17Q8TE56 1095 aa14.52□□□□□ -0.09
RTN3-214ENST00000545432 SLC41A2Q96JW4 573 aa14.52□□□□□ -0.09
RTN3-214ENST00000545432 ING2Q9H160 280 aa14.52□□□□□ -0.09
RTN3-214ENST00000545432 ZNF624Q9P2J8 865 aaPredicted RBP14.52□□□□□ -0.09
RTN3-214ENST00000545432 SIK3Q9Y2K2 1263 aa14.52□□□□□ -0.09
RTN3-214ENST00000545432 ZNF451Q9Y4E5 1061 aa14.52□□□□□ -0.09
RTN3-214ENST00000545432 TNRC6AQ8NDV7 1962 aaKnown RBP14.51□□□□□ -0.09
RTN3-214ENST00000545432 RGSL1A5PLK6 1076 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 CHUKO15111 745 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 GRID2O43424 1007 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 KIF1CO43896 1103 aaKnown RBP14.51□□□□□ -0.09
RTN3-214ENST00000545432 ATP1A3P13637 1013 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 ACP5P13686 325 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 ELAVL4P26378 380 aaKnown RBP14.51□□□□□ -0.09
RTN3-214ENST00000545432 MAPK9P45984 424 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 MAXP61244 160 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 CHRNA6Q15825 494 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 PRR30Q53SZ7 412 aaPredicted RBP14.51□□□□□ -0.09
RTN3-214ENST00000545432 CT47A1Q5JQC4 288 aaPredicted RBP14.51□□□□□ -0.09
RTN3-214ENST00000545432 CPZQ66K79 652 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 CYB5D1Q6P9G0 228 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 DCUN1D2Q6PH85 259 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 ABRAXAS1Q6UWZ7 409 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 SLC34A3Q8N130 599 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 BBS5Q8N3I7 341 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 RUFY1Q96T51 708 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 BARD1Q99728 777 aaKnown RBP14.51□□□□□ -0.09
RTN3-214ENST00000545432 AGPAT1Q99943 283 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 SYT11Q9BT88 431 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 NLRC4Q9NPP4 1024 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 FAM207AQ9NSI2 230 aaPredicted RBP14.51□□□□□ -0.09
RTN3-214ENST00000545432 ETNK2Q9NVF9 386 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 LNPEPQ9UIQ6 1025 aa14.51□□□□□ -0.09
RTN3-214ENST00000545432 ZNF106Q9H2Y7 1883 aaKnown RBP14.5□□□□□ -0.09
RTN3-214ENST00000545432 TMEM191CA6NGB0 347 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms