RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 TRIM14Q14142 442 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 GBX1Q14549 363 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 MAPRE1Q15691 268 aaKnown RBP6.78□□□□□ -1.32
LDHA-223ENST00000545215 SOWAHAQ2M3V2 549 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 ZNF699Q32M78 642 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 CFAP221Q4G0U5 840 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 ZNF542PQ5EBM4 170 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 C1orf220Q5T0J3 134 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 TMEM215Q68D42 235 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 TBC1D3GQ6DHY5 549 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 TBC1D3CQ6IPX1 549 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 ESRP1Q6NXG1 681 aaKnown RBP6.78□□□□□ -1.32
LDHA-223ENST00000545215 BHLHB9Q6PI77 547 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 VSTM1Q6UX27 236 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 APTXQ7Z2E3 356 aaKnown RBP6.78□□□□□ -1.32
LDHA-223ENST00000545215 MRGPRGQ86SM5 289 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 TBC1D3Q8IZP1 549 aaPredicted RBP6.78□□□□□ -1.32
LDHA-223ENST00000545215 ZNF366Q8N895 744 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 OR5B17Q8NGF7 314 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 OR6B3Q8NGW1 331 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 UHMK1Q8TAS1 419 aaKnown RBP6.78□□□□□ -1.32
LDHA-223ENST00000545215 CXorf38Q8TB03 319 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 MYLPFQ96A32 169 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 MAP6Q96JE9 813 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 SPATA17Q96L03 361 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 JMJD8Q96S16 334 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 IL12RB2Q99665 862 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 SYT15Q9BQS2 421 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 TTLL2Q9BWV7 592 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 EDEM3Q9BZQ6 932 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 SPRY4Q9C004 299 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 LRRN3Q9H3W5 708 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 CYP3A43Q9HB55 503 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 PLCB1Q9NQ66 1216 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 RRAGDQ9NQL2 400 aaPredicted RBP6.78□□□□□ -1.32
LDHA-223ENST00000545215 ACSS2Q9NR19 701 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 DNAJC28Q9NX36 388 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 TAB2Q9NYJ8 693 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 PLK2Q9NYY3 685 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.78□□□□□ -1.322e-12■■■□□ 19.2
LDHA-223ENST00000545215 CDH9Q9ULB4 789 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 CA5BQ9Y2D0 317 aa6.78□□□□□ -1.32
LDHA-223ENST00000545215 AQP9O43315 295 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 COCHO43405 550 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 ZRANB2O95218 330 aaKnown RBP eCLIP6.77□□□□□ -1.32
LDHA-223ENST00000545215 HLA-DRAP01903 254 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 TPM1P09493 284 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 FGF3P11487 239 aaPredicted RBP6.77□□□□□ -1.32
LDHA-223ENST00000545215 ATP1A3P13637 1013 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 BDNFP23560 247 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 LMO2P25791 158 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 PTX3P26022 381 aaPredicted RBP6.77□□□□□ -1.32
LDHA-223ENST00000545215 ANXA13P27216 316 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 MAGEA11P43364 429 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 ADPRHP54922 357 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 CORO7P57737 925 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 TNNC1P63316 161 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 UBXN1Q04323 297 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 ABHD18Q0P651 414 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 NR1I3Q14994 352 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 C16orf72Q14CZ0 275 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 CEBPEQ15744 281 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 PLEKHN1Q494U1 663 aaPredicted RBP6.77□□□□□ -1.32
LDHA-223ENST00000545215 CBWD6Q4V339 395 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 HSP90AA4PQ58FG1 418 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 ZNF667Q5HYK9 610 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 CRB2Q5IJ48 1285 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 CBWD3Q5JTY5 395 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 DNTTIP2Q5QJE6 756 aaKnown RBP6.77□□□□□ -1.32
LDHA-223ENST00000545215 CBWD5Q5RIA9 395 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 MROH9Q5TGP6 573 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 CPZQ66K79 652 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 FAM171BQ6P995 826 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 FRMD7Q6ZUT3 714 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 ANKS1BQ7Z6G8 1248 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 GAS2L3Q86XJ1 694 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 HPS6Q86YV9 775 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 NLGN4XQ8N0W4 816 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 SDR16C5Q8N3Y7 309 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 RBMXL3Q8N7X1 1067 aaKnown RBP6.77□□□□□ -1.32
LDHA-223ENST00000545215 ACBD4Q8NC06 268 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 NLGN4YQ8NFZ3 816 aaPredicted RBP6.77□□□□□ -1.32
LDHA-223ENST00000545215 OR14C36Q8NHC7 312 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 TAS1R2Q8TE23 839 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 NRGNQ92686 78 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 CEP295NLQ96MC4 621 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 ZNF830Q96NB3 372 aaPredicted RBP6.77□□□□□ -1.32
LDHA-223ENST00000545215 NT5C1BQ96P26 610 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 OMDQ99983 421 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 SARGQ9BW04 601 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 DDA1Q9BW61 102 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 TRIM5Q9C035 493 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 CIPCQ9C0C6 399 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 VPS16Q9H269 839 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 SNX25Q9H3E2 840 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 YY1AP1Q9H869 796 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 SLC6A20Q9NP91 592 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 CYTH4Q9UIA0 394 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 MYO6Q9UM54 1294 aa6.77□□□□□ -1.32
LDHA-223ENST00000545215 COA3Q9Y2R0 106 aaPredicted RBP6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms