RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 PHTF1Q9UMS5 762 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 ZNF451Q9Y4E5 1061 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 ATP6V1DQ9Y5K8 247 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 KIR2DS5A0A0G2JLQ3 304 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 A0A0G2JNG1 304 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 GOLGA6L4A6NEF3 574 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 F8VZ95 297 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 KIR2DS3K7RE56 304 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 TOX3O15405 576 aaPredicted RBP9.27□□□□□ -0.93
CHD4-212ENST00000545083 LRCH4O75427 683 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 UBXN7O94888 489 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 PGLSO95336 258 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 PEX11BO96011 259 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 MT-ND3P03897 115 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 MTIF2P46199 727 aaKnown RBP9.27□□□□□ -0.93
CHD4-212ENST00000545083 ZNF143P52747 638 aaPredicted RBP9.27□□□□□ -0.93
CHD4-212ENST00000545083 GSCP56915 257 aaPredicted RBP9.27□□□□□ -0.93
CHD4-212ENST00000545083 IL10RBQ08334 325 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 RFTN1Q14699 578 aaPredicted RBP9.27□□□□□ -0.93
CHD4-212ENST00000545083 KIR2DS5Q14953 304 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 MIIPQ5JXC2 388 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 TMCO4Q5TGY1 634 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 LRRC66Q68CR7 880 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 PWWP2BQ6NUJ5 590 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 PRSS42Q7Z5A4 293 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 SYVN1Q86TM6 617 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 PPP1R3BQ86XI6 285 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 SLC34A3Q8N130 599 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 ADAMTS17Q8TE56 1095 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 PIH1D2Q8WWB5 315 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 KLHL6Q8WZ60 621 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 MOCOSQ96EN8 888 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 SELENOOQ9BVL4 669 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 RIOK2Q9BVS4 552 aaKnown RBP9.27□□□□□ -0.93
CHD4-212ENST00000545083 PPIL1Q9Y3C6 166 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 PCDHGB7Q9Y5F8 929 aa9.27□□□□□ -0.93
CHD4-212ENST00000545083 A0A1W2PQ67 120 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 TCRBV5S1A1TA0A578 114 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 ANKUB1A6NFN9 424 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 SIGLEC16A6NMB1 481 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 EEF2KO00418 725 aaKnown RBP9.26□□□□□ -0.93
CHD4-212ENST00000545083 HNRNPRO43390 633 aaKnown RBP9.26□□□□□ -0.93
CHD4-212ENST00000545083 RASSF9O75901 435 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 GFPT2O94808 682 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 PDHA1P08559 390 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 UNGP13051 313 aaPredicted RBP9.26□□□□□ -0.93
CHD4-212ENST00000545083 FOLR1P15328 257 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 UCHL3P15374 230 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 ERCC2P18074 760 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 VARSP26640 1264 aaKnown RBP9.26□□□□□ -0.93
CHD4-212ENST00000545083 HNRNPH3P31942 346 aaKnown RBP9.26□□□□□ -0.93
CHD4-212ENST00000545083 HTR7P34969 479 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 SLC19A1P41440 591 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 RENBPP51606 427 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 ITGA1P56199 1179 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 MAXP61244 160 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 PPP1CAP62136 330 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 RPL7AP62424 266 aaKnown RBP9.26□□□□□ -0.93
CHD4-212ENST00000545083 CDR2Q01850 454 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 OGDHQ02218 1023 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 PTSQ03393 145 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 KCNAB1Q14722 419 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 MAN2A1Q16706 1144 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 PLEKHN1Q494U1 663 aaPredicted RBP9.26□□□□□ -0.93
CHD4-212ENST00000545083 CACHD1Q5VU97 1274 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 FAM69BQ5VUD6 431 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 CERS6Q6ZMG9 384 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 FAM92BQ6ZTR7 304 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 TMEM26Q6ZUK4 368 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 ZC3H18Q86VM9 953 aaKnown RBP9.26□□□□□ -0.93
CHD4-212ENST00000545083 NLRP8Q86W28 1048 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 ZNF677Q86XU0 584 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 RHOT1Q8IXI2 618 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 CISD2Q8N5K1 135 aaKnown RBP9.26□□□□□ -0.93
CHD4-212ENST00000545083 C3orf20Q8ND61 904 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 EXD1Q8NHP7 514 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 SEC14L1Q92503 715 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 MCEEQ96PE7 176 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 NUDCD1Q96RS6 583 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 WDR24Q96S15 920 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 KCTD15Q96SI1 283 aaPredicted RBP9.26□□□□□ -0.93
CHD4-212ENST00000545083 GPR87Q9BY21 358 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 STK33Q9BYT3 514 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 NDST4Q9H3R1 872 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 UCK1Q9HA47 277 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 ADAM22Q9P0K1 906 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 VPS18Q9P253 973 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 ZNF624Q9P2J8 865 aaPredicted RBP9.26□□□□□ -0.93
CHD4-212ENST00000545083 ENTPD4Q9Y227 616 aa9.26□□□□□ -0.93
CHD4-212ENST00000545083 FARSAQ9Y285 508 aaKnown RBP9.26□□□□□ -0.93
CHD4-212ENST00000545083 PCSK5Q92824 1860 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 A6NL46 340 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 OR5K4A6NMS3 321 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 FADS2P1A8MWK0 482 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 ZNF185O15231 689 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 FZD6O60353 706 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 SLC2A4P14672 509 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 AMD1P17707 334 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 NELFEP18615 380 aaKnown RBP9.25□□□□□ -0.93
CHD4-212ENST00000545083 XRCC1P18887 633 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms