RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 A0A0G2JND7 137 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 KPNA3O00505 521 aaPredicted RBP6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 MID1O15344 667 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 SNNO75324 88 aaPredicted RBP6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 WISP3O95389 354 aaPredicted RBP6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 S1PR4O95977 384 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 SOD1P00441 154 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 SLC4A1P02730 911 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 AHSGP02765 367 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 ITGA2BP08514 1039 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 ADRB3P13945 408 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 BGNP21810 368 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 TYK2P29597 1187 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 VIPR1P32241 457 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 GMPRP36959 345 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 PSMD8P48556 350 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 SERPINB8P50452 374 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 GTF2A1P52655 376 aaPredicted RBP6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 PGGT1BP53609 377 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 EPHB1P54762 984 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 STARD6P59095 220 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 KCNJ2P63252 427 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 MRPS21P82921 87 aaKnown RBP6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 OCRLQ01968 901 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 CREB5Q02930 508 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 RAD51Q06609 339 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 GRSF1Q12849 480 aaKnown RBP eCLIP6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 CTBP1Q13363 440 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 CST6Q15828 149 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 PREPLQ4J6C6 727 aaPredicted RBP6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 PSAPL1Q6NUJ1 521 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 ZNF549Q6P9A3 640 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 USP45Q70EL2 814 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 TECPR1Q7Z6L1 1165 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 GALNT7Q86SF2 657 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 LDB1Q86U70 411 aaPredicted RBP6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 MTDHQ86UE4 582 aaKnown RBP6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 ARMC2Q8NEN0 867 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 OR2T3Q8NH03 318 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 PPP1R14CQ8TAE6 165 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 COQ10AQ96MF6 247 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 RBBP8Q99708 897 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 BTBD10Q9BSF8 475 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 TMEM120AQ9BXJ8 343 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 HDAC8Q9BY41 377 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 SLC13A1Q9BZW2 595 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 CD93Q9NPY3 652 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 IARS2Q9NSE4 1012 aaKnown RBP6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 NFKBIL1Q9UBC1 381 aaPredicted RBP6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 WNT16Q9UBV4 365 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 MBD1Q9UIS9 605 aaPredicted RBP6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 CA14Q9ULX7 337 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 MMP17Q9ULZ9 603 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 FAM50BQ9Y247 325 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 ANKRD6Q9Y2G4 727 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 DOCK9Q9BZ29 2069 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 ZDBF2Q9HCK1 2354 aa6.96□□□□□ -1.3
HMGCS2-204ENST00000544913 A0A1W2PQ67 120 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 KLHL2O95198 593 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 CRTAMO95727 393 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 COL6A2P12110 1019 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 LEPRP48357 1165 aaKnown RBP6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 SPINT3P49223 89 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 LIMK2P53671 638 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 BST1Q10588 318 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 SF3A3Q12874 501 aaKnown RBP eCLIP6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 CHI3L2Q15782 390 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 SETMARQ53H47 684 aaPredicted RBP6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 LIPIQ6XZB0 460 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 ERN2Q76MJ5 926 aaKnown RBP6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 CACUL1Q86Y37 369 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 RPLP0P6Q8NHW5 317 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 RDH11Q8TC12 318 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 PIWIL2Q8TC59 973 aaKnown RBP6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 LPGAT1Q92604 370 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 SKA1Q96BD8 255 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 TSNARE1Q96NA8 513 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 FOXQ1Q9C009 403 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 KCNK13Q9HB14 408 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 ZFYVE1Q9HBF4 777 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 LTB4R2Q9NPC1 389 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 PCMTD2Q9NV79 361 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 NOP53Q9NZM5 478 aaKnown RBP6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 SUN2Q9UH99 717 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 DCTN4Q9UJW0 460 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 FBXO5Q9UKT4 447 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 SLC8A2Q9UPR5 921 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 APOBEC2Q9Y235 224 aaKnown RBP6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 FADS3Q9Y5Q0 445 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 C2orf81A6NN90 581 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 CHURC1-FNTBB4DL54 471 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 STX7O15400 261 aaKnown RBP6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 CD3EAPO15446 510 aaKnown RBP6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 PLIN3O60664 434 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 TOP3BO95985 862 aaKnown RBP6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 SERPINE1P05121 402 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 SERPINA6P08185 405 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 KRT16P08779 473 aa6.95□□□□□ -1.3
HMGCS2-204ENST00000544913 T-ENOLP0DO92 83 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms