RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 LOXL2Q9Y4K0 774 aa13.04□□□□□ -0.32
CIT-214ENST00000544588 SPO11Q9Y5K1 396 aa13.04□□□□□ -0.32
CIT-214ENST00000544588 TDRD6O60522 2096 aaKnown RBP13.03□□□□□ -0.32
CIT-214ENST00000544588 BTNL10A8MVZ5 291 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 PPM1DO15297 605 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 KCNN4O15554 427 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 PJA2O43164 708 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 BUD23O43709 281 aaKnown RBP13.03□□□□□ -0.32
CIT-214ENST00000544588 DNAJC6O75061 913 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 MTX2O75431 263 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 DXOO77932 396 aaKnown RBP13.03□□□□□ -0.32
CIT-214ENST00000544588 STK10O94804 968 aaKnown RBP13.03□□□□□ -0.32
CIT-214ENST00000544588 TJP3O95049 919 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 EPOP01588 193 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 PYGMP11217 842 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 HGFP14210 728 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 BPIP17213 487 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 CHRNA4P43681 627 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 PDX1P52945 283 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 MPP3Q13368 585 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 PRPSAP1Q14558 356 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 SIRPB2Q5JXA9 342 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 BROXQ5VW32 411 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 ITPRIPL1Q6GPH6 555 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 CRTC3Q6UUV7 619 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 ZNF761Q86XN6 746 aaPredicted RBP13.03□□□□□ -0.32
CIT-214ENST00000544588 SYCE1Q8N0S2 351 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 GLYATL1Q969I3 302 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 LIN37Q96GY3 246 aaPredicted RBP13.03□□□□□ -0.32
CIT-214ENST00000544588 AHCYL2Q96HN2 611 aaKnown RBP13.03□□□□□ -0.32
CIT-214ENST00000544588 OXNAD1Q96HP4 312 aaPredicted RBP13.03□□□□□ -0.32
CIT-214ENST00000544588 MRGPRX2Q96LB1 330 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 TTC25Q96NG3 672 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 CMKLR1Q99788 373 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 HERPUD2Q9BSE4 406 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 CARD9Q9H257 536 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 SEMA6CQ9H3T2 930 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 RMI1Q9H9A7 625 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 TRIM39Q9HCM9 518 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 ASCL3Q9NQ33 180 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 PACSIN2Q9UNF0 486 aaPredicted RBP13.03□□□□□ -0.32
CIT-214ENST00000544588 PCYT1BQ9Y5K3 369 aaPredicted RBP13.03□□□□□ -0.32
CIT-214ENST00000544588 ACACAQ13085 2346 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 FAM208BQ5VWN6 2430 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 PKD1L2Q7Z442 2459 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 PLXNB3Q9ULL4 1909 aa13.03□□□□□ -0.32
CIT-214ENST00000544588 FREM2Q5SZK8 3169 aa13.02□□□□□ -0.32
CIT-214ENST00000544588 LOC285095A0A1B0GVY8 99 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 GOLGA6L9A6NEM1 432 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 EIF4E1BA6NMX2 242 aaKnown RBP13.02□□□□□ -0.33
CIT-214ENST00000544588 NUAK1O60285 661 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 CPNE6O95741 557 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 FTCDO95954 541 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 AGTP01019 485 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 RBP3P10745 1247 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 HLA-DPA1P20036 260 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 MPSTP25325 297 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 UGT1A5P35504 534 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 MAPK9P45984 424 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 MAPK10P53779 464 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 GEMP55040 296 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 DCDC1P59894 354 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 CXADRP78310 365 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 EIF3IQ13347 325 aaKnown RBP13.02□□□□□ -0.33
CIT-214ENST00000544588 NFATC2Q13469 925 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 GTF2H3Q13889 308 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 SLC1A5Q15758 541 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 INSCQ1MX18 579 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 PLA2G4EQ3MJ16 856 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 GLT6D1Q7Z4J2 308 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 ADGRG6Q86SQ4 1221 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 C17orf82Q86X59 251 aaPredicted RBP13.02□□□□□ -0.33
CIT-214ENST00000544588 PHYKPLQ8IUZ5 450 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 SLC37A2Q8TED4 501 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 ALG3Q92685 438 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 PRR11Q96HE9 360 aaPredicted RBP13.02□□□□□ -0.33
CIT-214ENST00000544588 APOL2Q9BQE5 337 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 NUDT22Q9BRQ3 303 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 FICDQ9BVA6 458 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 TRABDQ9H4I3 376 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 STN1Q9H668 368 aaKnown RBP13.02□□□□□ -0.33
CIT-214ENST00000544588 KLC4Q9NSK0 619 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 TBC1D29Q9UFV1 150 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 EFR3BQ9Y2G0 817 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 DNAJC16Q9Y2G8 782 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 PKP3Q9Y446 797 aa13.02□□□□□ -0.33
CIT-214ENST00000544588 A0A0U1RQJ8 604 aa13.01□□□□□ -0.33
CIT-214ENST00000544588 ANXA9O76027 345 aa13.01□□□□□ -0.33
CIT-214ENST00000544588 CDK14O94921 469 aa13.01□□□□□ -0.33
CIT-214ENST00000544588 EML2O95834 649 aa13.01□□□□□ -0.33
CIT-214ENST00000544588 ITIH1P19827 911 aa13.01□□□□□ -0.33
CIT-214ENST00000544588 CD1CP29017 333 aa13.01□□□□□ -0.33
CIT-214ENST00000544588 CDC25BP30305 580 aa13.01□□□□□ -0.33
CIT-214ENST00000544588 CCKBRP32239 447 aa13.01□□□□□ -0.33
CIT-214ENST00000544588 GPR3P46089 330 aa13.01□□□□□ -0.33
CIT-214ENST00000544588 HHEXQ03014 270 aa13.01□□□□□ -0.33
CIT-214ENST00000544588 TLE3Q04726 772 aa13.01□□□□□ -0.33
CIT-214ENST00000544588 ZFP36L1Q07352 338 aaKnown RBP13.01□□□□□ -0.33
CIT-214ENST00000544588 ANKRD20A2Q5SQ80 823 aa13.01□□□□□ -0.33
CIT-214ENST00000544588 ANKRD20A1Q5TYW2 823 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms